A0A078J2X9 F1

Pectate lyase (EC 4.2.2.2)
Domain Eukaryota
Species (Full Name) Brassica napus (Rape)
Gene BnaCnng30870D DARMORV10_C09P04990.1 GSBRNA2T00019898001
PFAM codes  PF00544
InterPro codes  IPR002022,  IPR011050,  IPR012334,  IPR018082,  IPR045032
PDB structures (whole Protein) -
L0
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Protein name
Pectate lyase (EC 4.2.2.2)
Global pLDDT
87.06
Species
Rape
UniProt
Structure Prediction Model
AlphaFold v4:  A0A078J2X9
PDB structures
-
Model length
418
AlphaFold deposition date
2022-09-30
AlphaLasso deposition date
2024-11-09
Lasso types & Model sequence
Bridge type DeepShallow Lasso pLDDT Global pLDDT N-end GLN C-end GLN Loop range Loop Length N-term crossings C-term crossings N-end length C-end length Loop area
NoneNone 87.06 -0.27 0.199 66-78 13
65 340 100
Model Sequence
MGITQVLVLFASALLLSSMLFTGVDSTRSNETWHEHAVDNPDEVAAMVDMSTRNSTERRRLGYFSCSTGNPIDDCWRCDRKWKLRRKHLADCSIGFGRNAIGGRDGRYYVVSDPGDDNPVNPTPGTLRHAVIQDEPLWIVFKRDMVITLREELIMNSFKTIDGRGANVHIANGACVTIQYVTNIIIHGVHIHDCKPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSSCADGLIDAVMSSTAITISNNYFTHHNEVMLLGHSDTYTRDKVMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNRYLAPSNRFAKEVTKRDYAGEWQWKHWNWRSEGDLFLNGAFFTRSGSGLGASYARASSLAAKSSSLVGVITSNAGALNCRAGRRC
Lasso diagram
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