A0A0A0LYJ8 F1

Oligopeptide transporter
Domain Eukaryota
Family Cucurbitaceae
Species (Full Name) Cucumis sativus (Cucumber)
Gene Csa_1G180750
PFAM codes  PF03169
InterPro codes  IPR004648,  IPR004813
PDB structures (whole Protein) -
LS3
Categories voted by users:
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Protein name
Oligopeptide transporter
Global pLDDT
83.88
Species
Cucumber
UniProt
Structure Prediction Model
AlphaFold v4:  A0A0A0LYJ8
PDB structures
-
AlphaKnot
Model length
745
AlphaFold deposition date
2022-09-30
AlphaLasso deposition date
2024-04-14
Lasso types & Model sequence
show shallow lasso Bridge type DeepShallow Lasso pLDDT Global pLDDT N-end GLN C-end GLN Loop range Loop Length N-term crossings C-term crossings N-end length C-end length Loop area
86.5985.98 83.88 1.722 0.183 251-726 476
+142, +176, -189 (-76), (+76), (-77), (+77), (+140), (-141), +142, +176, -189
250 19 9930
Model Sequence
MSSKTPPNQDSSAADKFNGGGELPSEDRCSVEEVALVVPETDDPTLPVMTFRSWVLGLASCCLLIFLNTFFTYRSQPLAISAILMQIAVLPIGRFMASTLPNRDFHFLRWKFSLNPGPFNMKEHVIITIFANCGISYGGGDAYSIGAITVMKAYYKQSLNFFLALLIVLTTQVLGYGWAGMLRRYLVDPVEMWWPANLAQVSLFRALHEKEDKSKGMTRMKFFLIFMGASFIYYAFPGYLLQILSFFSWVCWVWPHSITAQQIGSSKGGLGLGAFSFDWAGISAYHGSPLVSPWFSILNVGVGFVMFIYIIVPVCYWKFNTFDARKFPIFSNQLFTRTGQKYDTKKVLTPDFELNVAAYNSYGKLYLSPLFALSIGSGFARFTATLTHVALFHGRDIWKQSRAAIKNAKLDIHAKLMQRYKQVPEWWFLILLFGSIALSLLMSFVWKDTVQLPWWGMLFAFAMAWIVTLPIGVIQATTNQQPGYDIIAQFIIGYILPGKPIANLLFKIYGRISTVHALSFLSDLKLGHYMKIPPRCMYTAQLVGTLVAGTINLAVAWWMLDSIENICDDDALHAESPWTCPKYRVTFDASVIWGLIGPRRLFGPGGLYRNLVWLFLIGAVLPVPIWALSKAFPEKKWIALINIPVISYGFAGMPPATPTNIASWLMTGTVFNYFVFRYHKRWWQKYNYVLSAALDAGTAFMGVLLFFALQNAGHNLRWWGSQPDHCPLAKCPTAPGISVKGCPVF
Lasso diagram
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