A0A0J1FSW1 F1

N-acetylmuramoyl-L-alanine amidase LytC (EC 3.5.1.28)
Domain Bacteria
Family Desulfitobacteriaceae
Species (Full Name) Desulfosporosinus acididurans
Gene lytC_11 DEAC_c20870
PFAM codes  PF04122,  PF13620,  PF21783
InterPro codes  IPR007253,  IPR008969,  IPR011045,  IPR011048,  IPR011964,  IPR015943,  IPR048433
PDB structures (whole Protein) -
LLS1,8
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Protein name
N-acetylmuramoyl-L-alanine amidase LytC (EC 3.5.1.28)
Global pLDDT
78.12
Species
Desulfosporosinus acididurans
UniProt
Structure Prediction Model
AlphaFold v4:  A0A0J1FSW1
PDB structures
-
AlphaKnot
  A0A0J1FSW1 Unknown
Model length
1221
AlphaFold deposition date
2022-09-30
AlphaLasso deposition date
2024-04-14
Lasso types & Model sequence
show shallow lasso Bridge type DeepShallow Lasso pLDDT Global pLDDT N-end GLN C-end GLN Loop range Loop Length N-term crossings C-term crossings N-end length C-end length Loop area
75.2773.69 78.12 1.092 -8.185 91-385 295
+86 (+45), (-50), +86
-388, -428, -436, -447, -469, -490, -513, -555 (+387), (-387), -388, (+399), (-405), (+427), -428, (-428), (+429), (-429), (-430), (+430), -436, (+442), (-443), -447, -469, (-478), (+483), -490, -513, (+525), (-531), -555, (+567), (-571)
 90 836 6308
Model Sequence
MKRNGFLKLIFKKKWLFLLLTFIIITSTLVVDVKRVSAATVVPVGNYPCSVAVNTVTNKIYVANYESNSIMVIDGTTNTIDKAISVGNTPCSVAVNTVTNKIYVANPGSNSITVIDGATNTTGTAISLGNSPSAVAVNTVTNKIYVASGLSNSITVIDGVTNTIGTSISLGDSPSSVSVNTVTNKIYVANLGSNSITVIDGATNTIGIAISLGDSPSSVAVNPATNKIYVANVTSNSITVIDGATNTIGGTISVGTLPIAVATDSVTNKIFVTNIASNNVTVIDGATNTTYGTIFAGNMPYAVAVNPDTNKIYVANASSNSITVIDGATNPNGCTAISVGMPGAVAANSVTNKIYVTNPRSNAVTVIDGATNSTGTAISVGNNPCSVAVNSATNKIYVANYNSNNVTVIDGSNNATSGTIFVGNNPSAVAVNSVTNKIYVTNAGTNSITVIDGVTNTIGATISLGRNPLAVAVNSVTNKIYVTCPDSHNVMVIDGSTNSIDSNTSVDSIPCAVAVNSVNNKVYVANAGSNSIRVIDGATNATDTYISVGGYPIGVDVDTVTNKIYVANLQSNSVTVINEPSPTGVILGIVTDGTNPVAAVNVSLTVNGSVYSAVTGADGVYCIQNVPIGTGYTITASKTGYNNGSTTANVTEDTTTLGVNITLNNTTSGGGRSTPSGGGTTTVTGSVIDDNGIQVSNVTATVTEDSNGNYTVSMNAAQAVTLQQPNGTMSPLNDLSKVTFVSAAGSSVRVSADGTINLTNLAKGTDNNFNITYDLGNGQTITIGAMEVKISSSGATSVTCTLIDPYGIIIDAATGKPIAGVNVTLYYADTDRNKANGETPDTVVPLPNIDGFKPNNNMNPQISDASGSYGFMVFPTTDYYIVATKDGYNNYTSPTISVEQDIVKWDFKMNQTTSGVTRLAGQSRVDTALAIAKANYTGKLSNVILATADNYPDALAGSVLAYKLNAPILLVGSSDTDQEKVLDYMKSNLDPAGGVYILGGTAVVSSSMEGKVTASGFANITRLGGTDRYETSAKIADKLKVKTGTPLVIAYGENYPDALTISSIAAEMQYPILLVQKNGLSDVVKNEIAAIKPSKVYIIGGERVISADVESQVAQMASIEKSNIVRIAGTDRYETSLAVAQYFNLLTGNVCIATGNNFPDALAGSVYAANHDAPIILADGNLSDQVINYLKATKLTGATLFGGEAVVSKDIEQQLGHLIGH
Lasso diagram
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