A0A178WCB0 F1

PGSIP2
Domain Eukaryota
Family Brassicaceae
Species (Full Name) Arabidopsis thaliana
Gene AXX17_At1g71660
PFAM codes  PF01501
InterPro codes  IPR002495,  IPR029044
PDB structures (whole Protein) -
L1 L2 L1 LLS1,4 LS5
Categories voted by users:
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Protein name
PGSIP2
Global pLDDT
75.62
Species
Arath
UniProt
Structure Prediction Model
AlphaFold v4:  A0A178WCB0
PDB structures
-
AlphaKnot
  A0A178WCB0 Unknown
Model length
1259
AlphaFold deposition date
2022-09-30
AlphaLasso deposition date
2024-04-15
Lasso types & Model sequence
show shallow lasso Bridge type DeepShallow Lasso pLDDT Global pLDDT N-end GLN C-end GLN Loop range Loop Length N-term crossings C-term crossings N-end length C-end length Loop area
78.6678.31 75.62 -1.58 0.252 803-906 104
-201 (+168), (-172), -201
802 353 1426
77.8177.81 75.62 -1.074 0.235 826-866 41
+168, -201 +168, -201
825 393 518
78.0178.01 75.62 -0.385 -1.182 196-299 104
-854 -854
195 960 1361
80.1580.15 75.62 1.052 -3.359 333-573 241
+323 +323
+923, -1123, -1167, -1170 +923, (+950), (-951), -1123, -1167, -1170
332 686 4002
80.0880.08 75.62 -4.239 0.286 940-1180 241
-183, -499, -545, -547, +931 -183, -499, (+500), (-500), -545, -547, +931
939 79 3749
Model Sequence
MKLSSESPMAPSSQSSHRLYISRSVFICWLDIVHLFYIYSEKTKTKRFQRNGYTLDVEMCVNFSSLKLVLFLMMLVAMFTLYCSPPLQIPEDPSSFANKWILEPAVTTDPRYIATSEINWNSMSLVVEHYLSGRSEYQGIGFLNLNDNEINRWQVVIKSHCQHIALHLDHAASNITWKSLYPEWIDEEEKFKVPTCPSLPWIQVPDKSRIDLIIAKLPCNKSGKWSRDVARLHLQLAAARVAASSEGLHDVHVILVSDCFPIPNLFTGQELVARQGNIWLYKPKLHQLRQKLQLPVGSCELSVPLQAKDNFYSANAKKEAYATILHSDDAFVCGAIAVAQSIRMSGSTRNLVILVDDSISEYHRSGLESAGWKIHTFQRIRNPKAEANAYNQWNYSKFRLWQLTEYNKIIFIDADMLILRNMDFLFEYPEISTTGNDGTLFNSGLMVIEPSNSTFQLLMDHINDINSYNGGDQGYLNEIFTWWHRIPKHMNFLKHFWEGDTPKHRKSKTRLFGADPPILYVLHYLGYNKPWVCFRDYDCNWNVVGYHQFASDEAHKTWWRVHDAMPKKLQRFCLLSSKQKAQLEWDRRQAEKANYRDGHWRIKIKDKRLTTCFEDFCFWESMLWHWGDYEILETDPGLTETMIPSSSPMESRHRLSFSNEKTSRRRFQRIEKGVKFNTLKLVLICIMLGALFTIYRFRYPPLQIPEIPTSFGLTTDPRYVATAEINWNHMSNLVEKHVFGRSEYQGIGLINLNDNEIDRFKEVTKSDCDHVALHLDYAAKNITWESLYPEWIDEVEEFEVPTCPSLPLIQIPGKPRIDLVIAKLPCDKSGKWSRDVARLHLQLAAARVAASSKGLHNVHVILVSDCFPIPNLFTGQELVARQGNIWLYKPNLHQLRQKLQLPVGSCELSVPLQAKDNFYSAGAKKEAYATILHSAQFYVCGAIAAAQSIRMSGSTRDLVILVDETISEYHKSGLVAAGWKIQMFQRIRNPNAVPNAYNEWNYSKFRLWQLTEYSKIIFIDADMLILRNIDFLFEFPEISATGNNATLFNSGLMVVEPSNSTFQLLMDNINEVVSYNGGDQGYLNEIFTWWHRIPKHMNFLKHFWEGDEPEIKKMKTSLFGADPPILYVLHYLGYNKPWLCFRDYDCNWNVDIFQEFASDEAHKTWWRVHDAMPENLHKFCLLRSKQKAQLEWDRRQAEKGNYKDGHWKIKIKDKRLKTCFEDFCFWESMLWHWGETNSTNNSSTTTTSSPPHKTALPSL
Lasso diagram
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