A0A1J3EDH1 F1

Oligopeptide transporter 3
Domain Eukaryota
Family Brassicaceae
Species (Full Name) Noccaea caerulescens (Alpine penny-cress) (Thlaspi caerulescens)
Gene LC_TR19846_c0_g1_i1_g.66352
PFAM codes  PF03169
InterPro codes  IPR004648,  IPR004813
PDB structures (whole Protein) -
LS2 LS3
Categories voted by users:
Structure view
Help
Protein name
Oligopeptide transporter 3
Global pLDDT
81.62
Species
Alpine penny-cress
UniProt
Structure Prediction Model
AlphaFold v4:  A0A1J3EDH1
PDB structures
-
AlphaKnot
Model length
775
AlphaFold deposition date
2022-09-30
AlphaLasso deposition date
2024-04-14
Lasso types & Model sequence
show shallow lasso Bridge type DeepShallow Lasso pLDDT Global pLDDT N-end GLN C-end GLN Loop range Loop Length N-term crossings C-term crossings N-end length C-end length Loop area
NoneNone 81.62 1.727 0.187 281-756 476
+171, +206, -218 +171, +206, -218
280 19 10050
83.2183.21 81.62 0.169 2.361 24-566 543
+682, +725 (-617), (+618), (-619), (+619), (-619), (+620), (-620), (+621), (-621), (+621), +682, (-683), (+684), (-687), (+687), (-689), (+690), +725
23 209 13113
Model Sequence
PILTVVVDLVSVLWLYINKTTQLCHVLERGRRRRSKRKKMDAEKANNGHISSTEQHERCPVEEVALVVPETDDPTLPVMTFRAWFLGLASCVLLIFLNTFFTYRTQPLTISAILMQIAVLPIGKFMARTLPTTSHKLMGKEFSLNPGPFNIKEHVIITIFANCGVAYGGGDAYSIGAITVMKAYYKQSLTFICGLFIVLTTQILGYGWAGILRRYLVDPVDMWWPSNLAQVSLFRALHEKEHKSKGLTRMQFFLLALGASFLYYALPGYLFPILTFFSWVCWAWPNSITAQQVGSGYHGLGVGAFTLDWAGISAYHGSPLVAPWSSILNVGVGFIMFIYIIVPLCYWKFDTFDARKFPIFSNQLFTSTGQKYDTTKILTPRFDLDINAYNNYGKLYLSPLFALSIGSGFARFTATLTHVALFNGRDIWRQTWSAVKTVKLDVHGKLMQSYKQVPEWWFYILLAASVAMSLLMSFVWKESVQLPWWGMLFAFALAFIVTLPIGVIQATTNQQPGYDIIGQFMIGYILPGKPIANLIFKIYGRISTVHALSFLADLKLGHYMKIPPRCMYTAQLVGTVVAGVVNLGVAWWMLESIQDICDIQGVHPNSPWTCPKYRVTFDASVIWGLIGPKRLFGAGGMYRNLVWLFLIGAVLPVPVWAMSKIFPNKKWIPLINIPVISYGFAGMPPATPTNIASWLVTGTIFNYFVFNYHKRWWQKYNYVLSAALDAGTAFMGVLLFFALQNAGHELKWWGTEVDHCPLATCPTAPGIRVKGCPVF
Lasso diagram
Loading diagram...
Comments

The AlphaLasso website is licensed under CC BY 4.0