A0A1Y6CFA2 F1

Pectin methylesterase
Domain Bacteria
Family Alteromonadaceae
Species (Full Name) Alteromonadaceae bacterium Bs31
Gene SAMN02745866_03985
PFAM codes  PF01095,  PF03422
InterPro codes  IPR000070,  IPR005084,  IPR008979,  IPR011050,  IPR012334
PDB structures (whole Protein) -
LS3 LS6
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Protein name
Pectin methylesterase
Global pLDDT
79.44
Species
Alteromonadaceae bacterium
UniProt
Structure Prediction Model
AlphaFold v4:  A0A1Y6CFA2
PDB structures
-
AlphaKnot
  A0A1Y6CFA2 Unknown
Model length
1158
AlphaFold deposition date
2022-09-30
AlphaLasso deposition date
2024-04-14
Lasso types & Model sequence
show shallow lasso Bridge type DeepShallow Lasso pLDDT Global pLDDT N-end GLN C-end GLN Loop range Loop Length N-term crossings C-term crossings N-end length C-end length Loop area
72.2772.27 79.44 3.033 0.416 864-924 61
+788, +790, +821 +788, +790, +821
863 234 801
78.7583.06 79.44 -0.451 4.146 707-831 125
+864, +897, +918, +952, -978, -1003 +864, +897, +918, +952, (-956), (+957), -978, (+980), (-981), -1003, (-1156)
 706 327 2125
Model Sequence
MFKRTLLSFSVAAALSLSAASSMAELVAFPGAEGYGKNTTGGRGGDVYIVTNLNSSGSGSLGDALSKGGRTVVFAVSGTIKGRFNVPNNTTIAGQTAPGDGITIHGQMTHGSNVIVRYLRVRFDGDGDEDAFGKRYQNNVMIDHVTASWSRDEVMSIYHGENVTIQWSMISEACPNEGTDSHRFGAIWGNNYGTYHHNLIAHNENRTPRWASGGGHNDFRNNVTYNWGYGGSYGAERQQVGNDNFIGTWTNVIANYYKPGPGTESEERIVAPSSRGSGDEGNWYVSDNYVVGSPTVTEDNWKGVQGSKYIKMSAPWDAMPINQETAEQAYESVLADVGASLPRRDDIDNRIVSDVRNGTATLGQNGYLACPEDTILPELYSAPAPIDSDSDGMPDDWELANGLNPNNASDRNNTDSIGYTMLENYINSLDSFPDSDSPSSSSSSSSSSSSSSSSSSSSSSSNSSSSSSTGSTSSSSSSSSSSSSSSSSSNSSSSSSGGGASLIIQEDDASFVSVDGSVDSNNPGFTGSGFANTENASGNGIEWLVSVPETSNYTFTIRYANGSSTNRTAKIDVDGDTVIENWDYDTTESWSNWGTTSIAVPLSSGSHLIRMEATNSSGLANIDYLAVEGAEGSGNSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSGSPISDELVLQEDATGFCDVDGTVDSNNAGFTGNGFANTENANGRTISWLVDAVYESTYGIEFRYASGSSNSRTATVYVNGNAQDTIDFSTTGSWTSWTIDMADVNLRSGLNDIVLQADTNEGLPNIDSLTIQGADITAADCDSIQPTPTPAPEATPTPVPDVTPTPTLSATPDCNSITDQEIIQVAADGSGQFSTLKSAMESLSTSNSNPVQIRVKPGIYDEKITFDRPNVTVCGEPGQAAQTIITHKENGTSTGFTIKITSDDVSFENMTVRNTETDGQAPALMITGDRIQFRNSQVLGYQDTLYARDGTSYFRDTLIEGRVDYIFGHGTSVYENCEIRTVESGSAMAAPATPASREWGLVFLGGKLTATSNIKDGSQWLARSWGAEGFTAFIGVELGAHIKGEGWGTMSQTEGKLDQARFYEYNSTGPGANPGARASEVAPQLTNAEAAEYTIENIFGSWTPSFSL
Lasso diagram
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