| Domain |
Archaea
|
| Species (Full Name) |
Thermococcus sp. P6
|
| Gene |
A3L12_00345
|
| PFAM codes |
PF00136, PF03104, PF14528
|
| InterPro codes |
 IPR003586, IPR003587, IPR004042, IPR004860, IPR006133, IPR006134, IPR006141, IPR006142, IPR006172, IPR012337, IPR017964, IPR023211, IPR027434, IPR030934, IPR036397, IPR036844, IPR042087, IPR043502, IPR050240
|
| PDB structures (whole Protein) |
-
|
| Protein name |
DNA polymerase (EC 2.7.7.7)
|
| Global pLDDT |
81.31
|
| Species |
Thermococcus sp
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A218PAH5
|
| PDB structures |
-
|
| AlphaKnot |
 A0A218PAH5 Unknown
|
| Model length |
1134
|
| AlphaFold deposition date |
2022-09-30
|
| AlphaLasso deposition date |
2024-11-06
|
| Bridge type | Deep Lasso pLDDT | Global pLDDT | N-end GLN | C-end GLN | Loop range | Loop Length | N-term crossings | C-term crossings | N-end length | C-end length | Loop area | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
 |
None | 81.31 | -0.12 | -0.172 | 788-802 | 15 | 787 | 332 | 119 | |||||||
Model Sequence |
MILDVDYVTEDGKPVIRIFRKENGEFRIDYDRDFEPYIYALVEDDSAVDEVKSITAERHGKMVGIKRVEKVRRKFLGRPIEVWKLVFEHPQDVPAIRDIIRNHPAVREIYEYDIPFAKRYLIDKGLVPMEGNEELRMMAFDIETLYHEGDEFGEGEILMISYADESGARVITWKKIDLPYVEVVSTEKEMIKRFLRLVKEKDPDVLVTYNGDNFDFAYIKKRAEKLGLKFILGRDSSEPKIQRMGDRFAVKVKGRIHFDLYPVIRRTLNLPTYTLEAVYEAIFGKPKEKVYAEEIATAWETGEGLERVARYSMEDAKTTYELGREFFPMEVELAKLVGQSVWDVSRSSTGNLVEWYLLREAYERNELAPNKPDAEEYKKRLRSTYLGGYVKEPEKGLWEGIAYLDFRCHPADTKVIVKGRGPVNISEVREGDYVLGINGWQRVKKVWEYDYRGELIKINGLRCTPNHRIPVVTKNERQTRIRDSLASSFLTHRVKGRIIMTPLFQRVGDLESASVDEEEILKGELVGILLAEGTLLRKDVEYFDSSRAKRRVSHQYRVEITIGAHEKEFLDRITYIFEKLFGVTPSVVRKGKTNGIAIRVAKKRVYLEIEKLMNNIENLHAPSIIRGFSEGDGTVNRVRRSVVISQGGDNRWKLELISKLLDKLGIPYSTYEYQYTENGKRLTRHILEITGRDGLILFQIFAGFISSRKKEMLREAIQNREMKGLENNSFYRLSDFAVEKEYYEGKVYDLTLEGSPYYFANGVLTHNSLYPSIIVTHNVSPDTLERECKNYHVAPVVGYRFCGDFKGFIPSILEELIETRQRVKRKMKATIDPVERKMLDYRQRALKILANSYYGYMGYPKARWYSKECAESVTAWGRHYIETTIKEAEGFGFKVLYADTDGFFATIPGEKPEVIKKRALEFLKHINKKLPGMLELEYEGFYMRGFFVTKKKYALIDEEGHITTRGLEVVRRDWSEIAKETQAKVLEAILKHGDVEEAVRIVREVTEKLSKYEIPPEKLVIHEQITRELKDYKATGPHVAIAKRLAERGVKIRPGTVISYIVLRGSGRIGDRAIPFEEFDPVKHKYDADYYIENQVLPAVERILRAFGYRKEDLRYQKTRQVGLGAWLKRGKKG
|
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A0A218PAH5