A0A2A2AKK5 F1

Pectate lyase superfamily protein domain-containing protein
Domain Bacteria
Family Comamonadaceae
Species (Full Name) Vandammella animalimorsus
Gene CK625_01810
PFAM codes  PF05048,  PF12708
InterPro codes  IPR006626,  IPR007742,  IPR011050,  IPR012334,  IPR024535
PDB structures (whole Protein) -
LS4 LS5
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Protein name
Pectate lyase superfamily protein domain-containing protein
Global pLDDT
73.81
Species
Vandammella animalimorsus
UniProt
Structure Prediction Model
AlphaFold v4:  A0A2A2AKK5
PDB structures
-
AlphaKnot
  A0A2A2AKK5 Unknown
Model length
847
AlphaFold deposition date
2022-09-30
AlphaLasso deposition date
2024-04-14
Lasso types & Model sequence
show shallow lasso Bridge type DeepShallow Lasso pLDDT Global pLDDT N-end GLN C-end GLN Loop range Loop Length N-term crossings C-term crossings N-end length C-end length Loop area
78.7178.71 73.81 -4.684 0.791 534-689 156
-152, -152, -153, -254 -152, -152, -153, -254
533 158 2474
78.2378.23 73.81 -0.32 -4.741 151-321 171
-586, -609, -637, -641, -671 (-555), (+556), -586, -609, -637, (+639), (-640), -641, -671
150 526 2662
Model Sequence
MRAKRLAMLALAVSLAACGGGGDSQSDNRPPAPNPAPGPQPNPTPSQPPAPAPVPAPRPPAPAPAPAPAPAPAPAPQPPAPAPSPTPPSPPAPAPAPPAPAPVPPSPPAPAPAPAPAPAPAPAPVPPSPPAPAPTPAPAAEPVPPPTAGACVPMPASALTVNVKDKGAKGDGQADDTAAIQAALDEAAGSGGRVWIPAGTYMIDATVNACGGWGQERCGLQMRSGVTVHMSQQAVLKAMPNGSRHYNIFHFNDVENAHVLGGHLQGERYAHRIPADGQLGEWGAGLVMRGARHAAIENVTAREFWGDGFYVGGGSQNVKFCAVVADKNRRQGMSITDVDTIVVQDSVFKNTHGTPPQDGIDIEPWGQENEPIREHVKNVTIRRSQFINNAGRGIGMVTTHPGQIENVVLEGNTFIDNSIGLGLGNRSWKTRITGNRIINSQYRNIGLGPLATFITVTDNAVTGQPGAALDRLIVDEPSADGSPKHNTIANNRLDRLAAVPLLPPNAAPVAAPAPIPPAPVANPSPTPAPTAGQCAPMPAAGQAVNVRDKGAKGDGRSDDTAAIQAAIDQAAGTNGMVWVPDGTYLIDPAKRLFMRSHMTLRLAEQAVLKAKPASVSFYDIVRFEQVDNARLVGGAVLGERHTHQGAEGAWGTGVMVAGSSRIVIEQVKVQDAWGDGLAVTQASRDVQLCNVVAEGNRRRGLAIASAQDVLVQGGRYHSTHGVAPMTGIDIRPGKDETIHNVRITQAHVAGNRGYGIYAGVPYEVSASSARVSGVQIEGNTFEPNYLRSVTLERISGSSIRNNRLWHTGLWLTSTTSGNTVTGNHIHRHTILDQGTGNSISGNTIFNP
Lasso diagram
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