A0A2A6BNL1 F1

Amino acid transporter
Domain Eukaryota
Family Neodiplogasteridae
Species (Full Name) Pristionchus pacificus (Parasitic nematode)
Gene WBGene00101567 PRIPAC_48906
PFAM codes  PF01490
InterPro codes  IPR013057
PDB structures (whole Protein) -
LLS1,10 LS6 LS8 LSLS2,10
Categories voted by users:
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Protein name
Amino acid transporter
Global pLDDT
73.56
Species
Parasitic nematode
UniProt
Structure Prediction Model
AlphaFold v4:  A0A2A6BNL1
PDB structures
-
AlphaKnot
  A0A2A6BNL1 Unknown
Model length
1086
AlphaFold deposition date
2022-09-30
AlphaLasso deposition date
2024-04-15
Lasso types & Model sequence
show shallow lasso Bridge type DeepShallow Lasso pLDDT Global pLDDT N-end GLN C-end GLN Loop range Loop Length N-term crossings C-term crossings N-end length C-end length Loop area
77.2377.26 73.56 2.267 -6.344 266-539 274
+111, +187 (+103), (-104), (+110), (-110), +111, +187
-672, -674, -677, -716, -774, -823, +893, +894, +899, -920 -672, -674, (+676), (-676), -677, (+679), (-679), (-680), (+680), (-680), (+680), -716, (+746), (-754), -774, -823, (+824), (-825), +893, +894, (-895), (+896), +899, (-919), (+919), -920
 265 547 6243
77.2577.27 73.56 1.349 -6.35 215-517 303
+112 (-102), (+103), (-104), (+104), (-105), (+107), (-108), (+108), (-110), (+110), +112, (+188), (-191)
-670, -673, -675, -715, -770, -823, +894, +896, +899, -918 -670, -673, -675, (-679), (+680), -715, (+753), (-754), -770, (+772), (-774), -823, (+824), (-825), (+825), (-825), (+826), (-826), +894, +896, +899, -918, (+919), (-920)
 214 569 6235
76.0976.09 73.56 4.523 -0.336 790-1063 274
-178, -374, +421, +426, +631, +712 -178, (+179), (-179), (-181), (+186), -374, +421, +426, (-491), (+492), (-495), (+501), (+627), (-628), +631, (-632), (-632), (+632), (+632), (-634), (+636), (-638), (+639), +712
789 23 5870
76.6976.69 73.56 -4.151 0.382 739-1042 304
-178, -284, -374, +421, +426, -495, +512, +639 -178, (-180), (+180), (-181), (+186), (+277), (-277), (-277), (+279), (-281), (+282), -284, (+287), (-288), -374, (-414), (+418), (-419), +421, (+421), +426, (-471), (+471), (-471), (+472), -495, (-502), (+502), (+503), (-505), +512, (-626), (+627), (-628), (+629), (-630), (+630), (-631), (+631), (+632), (-634), (+636), (-637), +639, (+712), (-713), (+714), (-715), (+716), (-717)
738 44 6565
Model Sequence
MNLAEQLVILPSLILDASKHISSPIFNTISSFVDSYYTERQEASEQLCQAFDEIVSQPWSTAKEGEEKSEGSEEGTIVDGHFENKHGIHWIIVAILIVGEMAGGGLVALPSSMVDAGIYAGAALTIISAIFSGYTGVQLGENWLMMQERWSDYRHACRKPYPEMAYRALGGWGRVAMSILISVQQFCLSVIFLLLASNNITSLLFDLFSWKLNFCYIALIVTVVLLPLLMLGSPKDFWQAALIAVVSTSTAIVLIFIGAAHDQEECMKEPDYPAVVFEKFFLAYGTIMFAYGGHACFPTFQHDMKKPQDFSKAVILGYVVIIIMYLPISIYGYLVYGGSLSSGSIIPSLQLNWVQTAVNILITLHVVFTEIIVISPLALNLEELFRIPNKFGIRRVILRTIIMFCVLFMALSIPKFGPIVDLVGGSSVTLMTMVLPGIFSLSLVAGKRKRDLKLLNGEVTRSEEDNELPSFFEVLKLNKPWMLLLNLVIIAFGVFGGVASTVSAVNELITTSWDVPCYVQIFMTGGLSFSGDGGLVNCCGLYKNVTTVDVPVGEAFFARRSVVINERAMGRSGNYKISPTQPIAQEWNTTEKVEKNDYGSVVNDHFQNKHGINWFIVAILIVGETAGGGLVALPSSMVKTGAWAGAALIIISAIASCYTAVQLGQNWIMMQDRWSEYRHSCREPYPEMAYRALGLWARVAMSILLGVQQFCLSVVFLLLASNNIATLLFTLFWIKLNFCFVALIVTAILLPLLMLGTPKDFWQMGLVALISTSTAIVLIFIGTAHDQDECMKEAYYPPVVFEKFSLTYGTIMFAYGGHACFPTFQHDMKKPQDFYKSAIVGFVVMLIMYLPISIYGYLVYGGSLSGGSIIPSIQLNWVQIAVNILVTVHVIVTLIILISPLNLSLEELFKVPNKFGIGRIIIRTLIIICVLFTALSIPKFGPIVDLVGGSTVSLISMILPGVFFMSLVAGKRKSDLKSGTKGDISTSDDQNDRPTLSEIFSLNNPWVLLINFLVIAFGVCGGIASTISAVNELISTSWEVPCYVQIIMGTLNFNADGGLVNCCGRFKNVTTVDVSNPVSFCAAPGF
Lasso diagram
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