| Domain |
Eukaryota
|
| Species (Full Name) |
Punica granatum (Pomegranate)
|
| Gene |
LOC116208380 CRG98_031515
|
| PFAM codes |
PF00360, PF00512, PF00989, PF01590, PF02518, PF08446
|
| InterPro codes |
 IPR000014, IPR001294, IPR003018, IPR003594, IPR003661, IPR005467, IPR012129, IPR013515, IPR013516, IPR013654, IPR013767, IPR016132, IPR029016, IPR035965, IPR036097, IPR036890, IPR043150, IPR044767
|
| PDB structures (whole Protein) |
-
|
| Protein name |
Phytochrome
|
| Global pLDDT |
75.12
|
| Species |
Pomegranate
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A2I0IVM8
|
| PDB structures |
-
|
| AlphaKnot |
 A0A2I0IVM8 41
|
| Model length |
1144
|
| AlphaFold deposition date |
2022-09-30
|
| AlphaLasso deposition date |
2024-10-29
|
| Bridge type | Deep Lasso pLDDT | Global pLDDT | N-end GLN | C-end GLN | Loop range | Loop Length | N-term crossings | C-term crossings | N-end length | C-end length | Loop area | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
 |
None | 75.12 | -0.264 | -0.274 | 1075-1125 | 51 | 1074 | 19 | 569 | |||||||
Model Sequence |
MASTSKGATSQSQKQQQQQQQQQQHAQSSHNNTNYSMRAIADSSVNKAIAQYTVDARLHAVFEQSGESGKSFDYSQSIKTPAQSVPEQQITAYLSRIQRGGHIQPFGCLMAVDESTFRVIAYSENAHELLGLNPQSVPSLDRPPETLSVGTDVRTLFTPSSAILLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIQLLCDTVVQSVRELTGYDRVMVYKFHEDEHGEVVAECKSPDLDPYIGLHYPATDIPQASRFLFKQNRVRMIVDCDTKPVRVVQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDEEVVGGRNAMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPLGIVTQSPSIMDLVKSDGAALYYHGKYYPLGVTPSEAQIRDIVEWLLAFHGDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITKQDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDAEPGNSKAVVSAQMGDLELQGLDELSSVAREMVRLIETATAPIFAVDVDGHINGWNAKIAELTGLPVEEAMGKSLVHDLVYKESAETVDKLLFHALRGEEDKNVEIKLKTFGPESHDEAVFVVVNACSSKDYTNNIVGVCFVGQDVTGQKVVMDKFINIQGDYKAIVHSPNPLIPPIFATDENTCCSEWNTAMEKLTGWPRGEVMGKMLVGEVFGSLCRLKGPDAITKFMIVLHNATAGQDADKFPFSFYDRNGKYVQALLTANKRVNMEGQIIGAFCFLQIASPELQQALKVQRQQEKKCFSRMKELAYICQEIKNPLNGIRFTNSLLEATELTEDQKQFLETSAACEKQMMKIIRDVDLERIEDGSLELKKFEFFLGSVINAVVSQVMILLRERGLQLIRDIPDEIKTMAVYGDQLRIQQVLADFLLNIVRCAPSLEGWVEIHVRPSLKQISDGLTVVHTEFRMVCPGEGLPPELVQDMFHSSQWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFIIILELPVPPRPPKSLE
|
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A0A2I0IVM8