A0A3M4P5M9 F1

YD repeat protein
Domain Bacteria
Family Pseudomonadaceae
Species (Full Name) Pseudomonas viridiflava
Gene ALP98_04459
PFAM codes  PF05488,  PF05593,  PF20148
InterPro codes  IPR006530,  IPR008727,  IPR031325,  IPR045351
PDB structures (whole Protein) -
LL1,1
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Protein name
YD repeat protein
Global pLDDT
81.69
Species
Pseudomonas viridiflava
UniProt
Structure Prediction Model
AlphaFold v4:  A0A3M4P5M9
PDB structures
-
AlphaKnot
Model length
920
AlphaFold deposition date
2022-09-30
AlphaLasso deposition date
2024-04-14
Lasso types & Model sequence
show shallow lasso Bridge type DeepShallow Lasso pLDDT Global pLDDT N-end GLN C-end GLN Loop range Loop Length N-term crossings C-term crossings N-end length C-end length Loop area
76.6676.63 81.69 -1.692 -1.775 41-199 159
-16 (-2), (+5), (-5), (-12), (+13), (-14), (+15), -16
-608 (+313), (-320), (+334), (-335), (-591), (+592), (-593), (+594), -608
40 721 4077
Model Sequence
MFEAARLLDEIEHTGAMAGFVLGAIVGIAAVAYVSLTFATCGFGGFLLAMAVGLAGNAIASIGESIGSAFSSPAGQIESASPNVFINGRPAAFAIESTAVCDKHSPIVKVAEGSSNVFINGQPAARKGDKLTCGAKIGTGSPNVFIGGGTQRYLPVDDEVSAMARYTVDILLVVAGGAKAVLSIAKLGMQAGLKAAGPCALQFMGGVFLGDAIFRFGVAPVAEKVLGGLHGNPVDTTTGRKLLIDESDFSLPGLMPIEWTRFYASDLDVDSALGKGWVLPWEQSLRRKGSFLYLSDNQGRSVPFVTLDYNQRIYNAQEQLYLVRTEGGHYLLQTLDNVFYYFGEVPDDNQPVPLQRVENALGHFLHFVRSEDGVLTDICATGGQRVHLHYDEVTSRLSTVKRIVDDKAVETLVRYGYDSNGQLNSVYNRNGGAVRNFNYTDGLMTRHANALGLSCEYRWETIDDKPRVVEHWTSDGEHFQFDYDFEARQTRVTDVLDRRAEVTWNKDRRVVASTDFGGEQYLIALDDTGNINGLTLPDGNQLGFEYDDLSRLTAETDPLGRTTRYQHHYKTTLVKQITYPDGSTWKARYDERGNLVAEIDALGHKTEYLNGEDGLPHTIVDPTLKSKYLWWNNLAQVERFQDCSGKSTYYRYDERHQLVAVTDALNNTTTLERKPGGEVLRIEHPDGTRESFTYNAHGQVLTHTDGKDQTTHLARNARGLPTRRQDPKGLMVAYQYDRALRLVALSNENDATYTFAYDHSDRLIEEKRIDQLTRRFSYNLGGHLTQVEETGYSEKGERPQRSTYFERDPIGRLLARLNDDARQDFTYDDSDRLLSIQRTPTDGGRKIGVTAEKLEFAYDILGRLTQESSPQGTLAYEYDPLSNLTTLTLPTGQHLNHLYYGSGHLHQLNLDGQLISDMER
Lasso diagram
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