A0A445IRN6 F1

Putative polygalacturonase
Domain Eukaryota
Family Fabaceae
Species (Full Name) Glycine soja (Wild soybean)
Gene D0Y65_027889
PFAM codes  PF00295
InterPro codes  IPR000743,  IPR006626,  IPR011050,  IPR012334
PDB structures (whole Protein) -
LLS1,20 L1 L2 L1 L3 L2 LS16
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Protein name
Putative polygalacturonase
Global pLDDT
74.62
Species
Wild soybean
UniProt
Structure Prediction Model
AlphaFold v4:  A0A445IRN6
PDB structures
-
AlphaKnot
  A0A445IRN6 Unknown
Model length
922
AlphaFold deposition date
2022-09-30
AlphaLasso deposition date
2024-04-15
Lasso types & Model sequence
show shallow lasso Bridge type DeepShallow Lasso pLDDT Global pLDDT N-end GLN C-end GLN Loop range Loop Length N-term crossings C-term crossings N-end length C-end length Loop area
76.4976.58 74.62 -0.644 10.134 47-461 415
-43 -43
+570, +595, +623, +629, +662, +678, +689, +696, +730, +758, -771, +788, -807, +827, +855, +859, -862, -862, -870, +881 (+508), (-516), (-544), (+544), (-545), (+549), (+567), (-568), (-568), +570, (+570), +595, (+617), (-619), (-620), (+621), +623, (+626), (-627), +629, +662, (+672), (-673), (+674), (-675), (-676), (+676), (+677), (-677), +678, +689, +696, (+702), (-704), (+707), (-707), (+708), (-709), +730, (-731), (+731), (+737), (-738), (+738), (-738), (+742), (+742), (-742), (-744), +758, (-768), (+769), (+769), (+769), (-770), (-770), -771, +788, (+793), (-794), (+795), (+795), (-796), (-796), (+798), (+798), (-800), (-802), -807, +827, (+833), (+834), (-836), (-836), (+837), (-841), +855, +859, -862, -862, -870, +881, (+883), (-886)
 46 461 10666
78.7178.71 74.62 1.57 -0.033 854-899 46
-385, +400 -385, +400, (-417), (+423)
853 23 782
77.777.7 74.62 1.176 0.401 873-888 16
+423 +423
872 34 215
77.9178.03 74.62 0.716 -1.268 399-444 46
+855, -870, +881 +855, -870, +881, (-882), (+883), (-884), (+885)
 398 478 712
77.7777.77 74.62 0.206 1.004 418-433 16
-869, +885 -869, +885
 417 489 231
76.4376.43 74.62 0.252 1.354 254-282 29
+737 +737
 253 640 451
76.776.7 74.62 10.798 0.163 502-916 415
-71, +85, +107, +130, +132, +159, +200, +214, +241, +242, +274, +368, -386, +396, -418, +423 -71, +85, (-102), (+102), (-103), (-104), (+105), (+106), +107, +130, +132, (-152), (-154), (-154), (+156), (+156), (+156), +159, (-193), (-194), (+194), (-196), (-197), (+197), (+197), (+198), +200, +214, +241, +242, +274, (+299), (+300), (-300), (-303), (+303), (-305), (+329), (-330), (+331), (+331), (-332), (-332), (+332), (-334), (+344), (-346), +368, (+369), (+370), (-370), (+371), (-371), (-372), -386, +396, (+397), (-398), -418, +423, (-445), (+453), (-499)
501 6 10029
84.7984.79 74.62 0.881 0.373 709-737 29
708 185 399
Model Sequence
MSQTMKLCSQVIGAISLVLILGSLNVKVVECKVGRGLKNTEYYAINCRKHSAVLTDFGGVGDGKTSNTKAFQSAIRKLGQYASDGGAQLIVPPGKWLTGPFNLTSHFTLFLHKDAVILASQVESEWPQLPVLPSYGRGRDAPGGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKNQLNLTRPYMIEIMYSDQIQISNLTLVNSPSCNITIKGLTILAPVDSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAMIALGSEMSGGIQDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMTLSTMKYVFWMTGSYGSHPDPAFDPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGICISNVSIQVSEQKKKLQWNCTDVAGVTSNVTPNTCQLLPEKGKFDCPFPNDKLSIENVQLKTCSIKKVIGVISLVLMLGSLNVKVAQCRVASKLVNIEYPAINCRKHSAVLTDFGGVGDGKTSNTKAFQSAISKLSRVASDGGAQLIVPPGKWLTGSFNLTSHFTLFLHKDAVILASQDESEWPQLPVLPSYGRGRDAPGGRFSSLIFGTHLTDVVITGQNGTIDGQGSYWWDKFHKNQLNLTRPYMIEIMYSDQIQISNLTLVNSPSCNITIKGLTILAPVDSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAMIALGSEMSGGIQDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMTLSTMKYVFWMTGSYGSHPDPAFDPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGICISNVSIQVSEQKKKLQWNCTDVAGVTSNVTPNTCQLLPEKGKFDCPFPNDKLSIENVQLKTCSLQNVF
Lasso diagram
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