A0A4Y1R2L2 F1

Pectin lyase-like superfamily protein
Domain Eukaryota
Family Rosaceae
Species (Full Name) Prunus dulcis (Almond) (Amygdalus dulcis)
Gene Prudu_007697
PFAM codes  PF00295
InterPro codes  IPR000743,  IPR006626,  IPR011050,  IPR012334
PDB structures (whole Protein) -
LS5 3L1 LS21
Categories voted by users:
Structure view
Help
Protein name
Pectin lyase-like superfamily protein
Global pLDDT
81.75
Species
Almond
UniProt
Structure Prediction Model
AlphaFold v4:  A0A4Y1R2L2
PDB structures
-
AlphaKnot
  A0A4Y1R2L2 Unknown
Model length
938
AlphaFold deposition date
2022-09-30
AlphaLasso deposition date
2024-04-15
Lasso types & Model sequence
show shallow lasso Bridge type DeepShallow Lasso pLDDT Global pLDDT N-end GLN C-end GLN Loop range Loop Length N-term crossings C-term crossings N-end length C-end length Loop area
80.2680.26 81.75 1.32 0.361 723-751 29
+337 +337
722 187 403
82.2682.26 81.75 0.183 1.514 423-438 16
+818 +818
 422 500 178
79.6279.62 81.75 0.364 1.416 259-287 29
+689 +689
 258 651 472
82.8482.84 81.75 0.491 4.934 404-450 47
+801, +817, +840, +852, +867 +801, +817, +840, +852, +867
 403 488 698
83.7383.73 81.75 10.961 0.204 508-931 424
+131, -261, -263, +278, +278, +280, -295, -296, +309, -321, -323, +337, +375, +377, +379, +404, +406, +407, +424, +431, +451 +131, (-191), (+192), (-240), (+243), -261, -263, (-270), (+270), (-276), (+277), +278, +278, +280, -295, -296, (-299), (-299), (+300), (+301), (-302), (+307), +309, -321, -323, (-332), +337, (+337), (-358), (+365), (+372), (-372), +375, +377, +379, (+381), (-381), (+393), (-397), (+400), (-401), (+402), (-403), +404, +406, +407, (+408), (-409), (+411), (-412), (+412), (-414), +424, (+426), (-426), +431, (+432), (+433), (-433), (+436), (-436), (-437), +451, (-505)
507 7 10497
90.6490.64 81.75 0.74 -0.08 868-914 47
867 24 672
Model Sequence
MDGKSKMSNVSGAIFFILGLFFLRAAECRTPANGGTVKYSALNCRKHSALLTDFGAVGDGKTSNTKAFKAAIHHLSQNASEGGAQLIVPPGKWLTGSFNLTSHFTLFLHKDAVILATQDESEWPLVSALPSYGRGRDAPGGRFSSLIFGTNLTDVVITGNNGTIDGQGASWWKKFKAGQLNETRPYMIEIMYSNQIQISNLTLVNSPSWFVHPTYSSNITIHGLTILAPIDSPNTDGINPDSCSQTRIEDCFIVSGDDCIAVKSGWDQYGIKVGIPTEHLVIRRLTCISPDSATIALGSEMSGGIRDVRAEDITALSTQSSVRIKTAQGRGGYVKDIFVRRMTLKTMKYVFWMTGSYGSHPDPGFDPKALPLIQNINYKQVEAENVTYSARLEGIPNDHFKGICISNVTITLTEKPKKLQWNCTDIAGVTSNVTPMACDLLPESKEVVDCPFPEDRLAIEDVKPMEGKSKMSKLSGAIFFILGLFFLRAAECRTPANWGTVKYSALSCRKHSALLTDFGAVGDGKTSNTKAFKAAIHHLSQSASDGGAQLIVPPGKWLTGSFNLTSHFTLFLHKDAVILATQDESEWPLVSVLPSYGRGRDAPGGRLSSLIFGTNLTDVIITGNNGTIDGQGASWWKKFKAGQLNETRPYMIEIMYSNQIQISNLTLVNSPSWFVHPIYSSNITIQGLTILAPINSPNTDGIDPDSCSQTRIEDCFIVSGDDCIAVKSGWDQYGIKVGIPTEHLVIRRLTCISPDSATIALGSEMSGGIRDVRAEDITALSTQSSVRIKTSQGRGGYVKDIFVRRMTLKTMKYVFWMTGSYGSHPDPGFDPKALPLIQNINYKQIKAENVTYSARLEGIPNDHFKGICISNVTITLTEKPKKLQWNCTDIAGVTSNVTPKACDLLPEKKEIIDCTFPEDRLAIEDVKLVTCSASLPIF
Lasso diagram
Loading diagram...
Comments
How to cite

The AlphaLasso website is licensed under CC BY 4.0