A0A5B8VC10 F1

T9SS type A sorting domain-containing protein
Domain Bacteria
Family Chitinophagaceae
Species (Full Name) Panacibacter ginsenosidivorans
Gene FRZ67_16685
PFAM codes  PF05345,  PF17963,  PF18962
InterPro codes  IPR013783,  IPR015919,  IPR022519,  IPR026444
PDB structures (whole Protein) -
LS17
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Protein name
T9SS type A sorting domain-containing protein
Global pLDDT
79.12
Species
Panacibacter ginsenosidivorans
UniProt
Structure Prediction Model
AlphaFold v4:  A0A5B8VC10
PDB structures
-
AlphaKnot
  A0A5B8VC10 Unknown
Model length
1021
AlphaFold deposition date
2022-09-30
AlphaLasso deposition date
2024-04-15
Lasso types & Model sequence
show shallow lasso Bridge type DeepShallow Lasso pLDDT Global pLDDT N-end GLN C-end GLN Loop range Loop Length N-term crossings C-term crossings N-end length C-end length Loop area
81.0681.04 79.12 -4.957 0.308 469-819 351
-83, +94, -104, +174, -186, -209, -231, -237, +249, -260, +277, -289, +299, -315, -340, +350, -464 -83, +94, -104, (+111), (-113), (+130), (-134), (+145), (-148), (-156), (+162), +174, -186, (+197), (-203), -209, (-221), (+225), -231, -237, +249, -260, +277, (+287), (-288), -289, +299, (-301), (+301), -315, -340, (+347), (-347), (+348), (-349), +350, (-442), (+451), -464
(+819), (-819), (+819), (-820)
468 202 9488
Model Sequence
MATLFTKTPKQNCNTKSMFTISLSFIILFSVLFTKTNAQDVLAGITSNGGVEGHGTVFSIKTNGSGFSVIQGFADWGKIPHGDLYKDTDGNFYGMTNLGGTYNQGTIFKMTPGGAVTIIRHLNSLTDGSNPYGELIKGTDGYLYGMTSAGGTNTYGTIFKMLPDGTSFQVLRNLAYATDGTNPRGHLVQAADGNFYGITYGGGANGGGTIFKITSTGTFSVLRHFNTTTDGNKSYNSLTLGKDGNLYGATYYGGTFGYGTIFKITTAGVYTVIKNLNGPTDGGSVQSDLIQGTDGYLYGTTSMYGTYGNGTIFKVSTAGVYTVLRHLSSGKDGGYPYGGLYQNTDGALYGLNRTGGTGGAGTAYKITTTGVYTVLHSFVTETEGNTPDGSFAKGNDGNLYALTSTGGTYNFGTAIKMTTTGAVTTLVHFNAATKGNAPMESLIKGKDSAFYGLNSEGGAYGYGTIFKICGGTTSILRSFNRSADGGYPMGSLIQATDGNFYGMTSDGGTYGYGTIFKITPGGVYTVLKHFSGTADGGNPNGSLVQATDGFLYGMAKGGGASAGGTIFKISTAGAFTLLHSFSYTTEGSSPEGDLVQATDGNFYGMTVSNGKLFKMTAAGVVTILHTFVTGTDGYSPFGSLIQAKDGKLYGMTTSGGTYGYGTIFNITTAGTFKTMKHFNPATDGKMPKGKLLQANDNNFYGLTSAGGTNNVGTIFKITPAGAYTVLRHFTMSTDGGSAFGSLIIAPVNNLIANTQSVTTDEDTKKIITLSGSGGSPLSYAITTSPRRGKLAGTGADKTYTPNANVSGKDSFYFSVKVGCISSAPAIVRITVKPIADTPVLAPIGNKSVVKNTTLTFTATATDGDAKTKFTYSLIGAPAGASINATSGVFTWTPATAGSYSFKVRVTDNSTLALYDDETITVTVTNTLTALTSADQGQAIINVQASIYPNPVHDKCYVTLNTPAEEVTIRIIDINGKIISTTSYEASGKNRIEINAAQLSRGIYFAQVQTPDGNVSLKFIKQ
Lasso diagram
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