A0A6J0KHG8 F1

Probable polygalacturonase
Domain Eukaryota
Family Brassicaceae
Species (Full Name) Raphanus sativus (Radish) (Raphanus raphanistrum var. sativus)
Gene LOC108818479
PFAM codes  PF00295
InterPro codes  IPR000743,  IPR006626,  IPR011050,  IPR012334
PDB structures (whole Protein) -
L0
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Protein name
Probable polygalacturonase
Species
Radish
UniProt
Structure Prediction Model
AlphaFold v4:  A0A6J0KHG8
PDB structures
-
Model length
471
AlphaFold deposition date
2022-09-30
AlphaLasso deposition date
2024-04-15
Lasso types & Model sequence
Bridge type DeepShallow Lasso pLDDT Global pLDDT N-end GLN C-end GLN Loop range Loop Length N-term crossings C-term crossings N-end length C-end length Loop area
95.9495.94 None -0.236 0.822 29-241 213
28 230 3533
Model Sequence
MKRSFLLWYVLLVQAYYGAWYSVGGSLHCEYSNSVILHRPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHLTLWLDKGATILGSTISENWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTIDGQGSVWWDWFRNGELNYTRPHLVELINTTGLIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPLDSPNTDGVDPDSSTDVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSEMSGGVSDIYIKDLNLLNSNTGIRIKTSPGRGGYVRNVHVSNLKFHNVQKAIRFTGKYGEHPDENFDPKALPAIEKITFENVSGEEIGVAGLLEGIEGDEFKNICFLNVTLTVKKNSKKSPWKCSHVRGYSQWVSPEITCDSFEESIFPEHSSDCFGLSENNLEKSSGLSRSPWLLSW
Lasso diagram
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