A0A6P5A9M1 F1

Glutamate receptor ionotropic, kainate 3-like
Domain Eukaryota
Family Branchiostomidae
Species (Full Name) Branchiostoma belcheri (Amphioxus)
Gene LOC109484139
PFAM codes  PF00060,  PF10613
InterPro codes  IPR001320,  IPR001508,  IPR015683,  IPR019594
PDB structures (whole Protein) -
L1
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Protein name
Glutamate receptor ionotropic, kainate 3-like
Global pLDDT
73.75
Species
Amphioxus
UniProt
Structure Prediction Model
AlphaFold v4:  A0A6P5A9M1
PDB structures
-
AlphaKnot
Model length
691
AlphaFold deposition date
2022-09-30
AlphaLasso deposition date
2024-04-14
Lasso types & Model sequence
Bridge type DeepShallow Lasso pLDDT Global pLDDT N-end GLN C-end GLN Loop range Loop Length N-term crossings C-term crossings N-end length C-end length Loop area
74.374.3 73.75 -1.465 0.271 538-592 55
-106 -106
537 99 895
Model Sequence
MDEPGSVLRVAVFERPPFVVKEASPTGYEWVGFCISLLEELSRILNFNYELYETPDGISGNELPDGTWSGVIGEITSGKADLAVSALSITSLREKAVDFTKPFMEYGNVLVMRKPSEQDRDLLAFVHPFQWKVWLCIAVSMFTVGILLFLTSRLRLKMNAGDRHADNDRAFNLRNSLWFVYWSMVRKGGEPPPRSLSTRIMAGFWWLFVLIVVSTYTANLTAFLTVKRLKHPVTSLDDLASQTKVKYGIVNHGSLYDFFQSQVGTSSSYERLWHGMTAKPEDSFVSSLEEGMKRTRQKADLAVSALTITSLREKVVDFTKPFMEYGNVLVMRRPSQEDRHILAFTHPFHWQVWLCIVTCMFTVGILLFLTSRLRLKMNAGDRHADNDRAFNLRNSLWFVYWSMMRKGGEPPPRSLSTRIMAGFWWLFVLIVVSTYTANLTAFLTVKRLKHPVTSLDDLASQTKVKYGIVNHGSLYDFFKAQESTSSIYERLWYGMKANPQESFVSNLHEGMDRARQGGYAFITDGTYFVYEAMKDPECRLSMVGAPFVYGGYGIATRNHSHWTEKLTVGILQLRELGRINTLRDRWWPKSECSLDGSNPRPNASGLTLADLKGVFYLLFCGLMLGVVVALCEIYWQKTHHAKESQHTMPMDEGHECTDHALLRECIRRVELGEIRVVFQKIESTNNKDGNP
Lasso diagram
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