A0A7C4XFD8 F1

YncE family protein
Domain Bacteria
Family Bacteria candidate phyla
Species (Full Name) candidate division WOR-3 bacterium
Gene ENV60_05900
PFAM codes  PF21783
InterPro codes  IPR011045,  IPR011048,  IPR011964,  IPR015943,  IPR048433
PDB structures (whole Protein) -
LSLS3,7 LSLS7,3 LSLS5,5 LSLS4,6
Categories voted by users:
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Protein name
YncE family protein
Global pLDDT
73.62
Species
candidate division
UniProt
Structure Prediction Model
AlphaFold v4:  A0A7C4XFD8
PDB structures
-
AlphaKnot
  A0A7C4XFD8 Unknown
Model length
756
AlphaFold deposition date
2022-09-30
AlphaLasso deposition date
2024-04-14
Lasso types & Model sequence
show shallow lasso Bridge type DeepShallow Lasso pLDDT Global pLDDT N-end GLN C-end GLN Loop range Loop Length N-term crossings C-term crossings N-end length C-end length Loop area
80.5680.0 73.62 -4.497 -6.81 140-477 338
-38, -42, -86, -129 -38, -42, (+52), (-53), (+55), (-59), -86, (+96), (-97), -129, (+139), (-139)
-508, -528, -550, -591, -610, -633 (+477), (-486), (+507), -508, (-508), (+518), (-519), -528, -550, (+550), (-550), (+551), (-552), (+562), (-565), (+565), (-568), (+569), (-570), -591, (-601), (+603), -610, -633, (+646), (-650)
 139 279 7874
80.5680.0 73.62 -3.381 -7.717 98-435 338
-38, -42, -86 -38, -42, (+53), (-53), (+55), (-59), -86, (+97)
-466, -508, -528, -550, -591, -610, -633 (+436), (-442), -466, (+477), (-486), (+507), (-507), -508, (+518), (-519), -528, (+549), -550, (-550), (+551), (-552), (+562), (-569), (+569), (-570), -591, (-601), (+603), -610, -633, (+646), (-650)
 97 321 7733
80.5480.0 73.62 -7.502 -3.509 224-561 338
-38, -42, -87, -129, -171, -192, -212 -38, -42, (-51), (+52), (+55), (-58), -87, (+96), (-97), -129, (+138), (-139), -171, -192, -212, (+223)
-591, -610, -634 (+562), (-565), (+566), (-570), -591, (-601), (+604), -610, (-633), (+633), -634, (+646), (-650)
 223 195 8083
80.5680.0 73.62 -5.436 -5.127 182-519 338
-38, -42, -86, -129, -171 -38, -42, (+53), (-53), (+54), (-59), -86, (+96), (-97), -129, -171, (+181), (-181)
-528, -550, -590, -610, -633 -528, (+549), -550, (-550), (+562), (-564), (+565), (-565), (+565), (-570), -590, (-601), (+604), -610, -633, (+646), (-650)
 181 237 7879
Model Sequence
MFIPKYNPFKFLFAMPLLLFGQWLETTIFLPDSLCGIDAPQSFTYNATNNRIHIGGYGGNCVLVLDATTDSKIAKIDIVAGRDIRDLCWNSVNNKVYCCSFYDSSVTVIDGVTNSVISTVITGRYSQSLIYNPTNNKVYCANGYSNTVSIIDGTTNQTIANIPVGTMPQDLIYNPNNNRIYCANFGSNDITVIDGAGDSILSTITSNSGPYALICNPAGTMVYCANYWSNNVAVIDATTDSLIAIIPTGDGPLNLVYNQTGNKIYTVNVWSNNVTVIDAMTNFVITNITVGDSPRDLVWDGIDNKVYVANRNDNTVSLIDCQSDSVIATVSVGKLPVSLIYNSFANKIYCADYGSDEVTVIEGTTNLVIKTIPVGYYFPFALTYNSLNHKLYSANYTANNITVIDGITNQVLKTISVGNCAWDLIYNSTNNKVYCINYNDNNVAVIDCPTDSVITTLGVGSYPWTLLYNPISNKIYCANWLSSNVTIIDGMADSVIKTVSVGIYPCALVHNSMTNKVYCANSGSDNISVIDGATDSVIATIGVGSSPDILVYNPIRNKVYCANWESDNLTVIDGAGDSIITTIPVGDAPNALLYISPGDRIYCANRYSNNVSIIDGETNSIVASITVGNSPVDLTYNPEQNRIYVANFDCSSISVIKDPTGIKESEGLKVKDEGLKLEVLPNVVKENARIQYAISERQKIRLVLYDIGGRRITTLAEGIFDPGVHTFDVAKNFICHKFKDRNFNNSYPSKITNSAT
Lasso diagram
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