A0A816SDQ0 F1

VCBS repeat-containing protein
Domain Eukaryota
Family Gnathifera
Species (Full Name) Rotaria magnacalcarata
Gene WKI299_LOCUS15999
PFAM codes  PF13517
InterPro codes  IPR013517,  IPR028994
PDB structures (whole Protein) -
LSLS6,8
Categories voted by users:
Structure view
Help
Protein name
VCBS repeat-containing protein
Global pLDDT
77.69
Species
Rotaria magnacalcarata
UniProt
Structure Prediction Model
AlphaFold v4:  A0A816SDQ0
PDB structures
-
AlphaKnot
  A0A816SDQ0 Unknown
Model length
712
AlphaFold deposition date
2022-09-30
AlphaLasso deposition date
2024-04-15
Lasso types & Model sequence
show shallow lasso Bridge type DeepShallow Lasso pLDDT Global pLDDT N-end GLN C-end GLN Loop range Loop Length N-term crossings C-term crossings N-end length C-end length Loop area
79.5279.52 77.69 -3.335 -5.841 142-534 393
-29, -45, -50, +60, +74, -98 -29, -45, -50, (+58), (-58), +60, +74, (-77), (+79), (+87), (-94), -98, (-120), (+121), (-141)
-546, -566, -584, +598, -631, -662, -680, +706 (-534), (+535), (-535), -546, (+551), (-555), -566, -584, +598, (-607), (+609), -631, (-658), (+658), -662, (-671), (+675), -680, (+695), (-695), (+701), (-703), +706
141 178 8974
NoneNone 77.69 0.479 0.063 26-711 686
25 1 15417
Model Sequence
MVSILLIFLILLNINTTIENLAQPDCQTPFGPNNRYSTQINPVSIINGYFNNDAKLDLAIANDVLNSVSILFNNGDGTFQNQKVYEVGAFPVSVTVGDFNNDAKLDLVTANQAENTISILLNNGNGTFQKEKKYSVGTSPTCVTVGDFNNDTKLDLATTNNDDRTISILFGKGDGTFENEKKYEVGSQPQALTVGDFNNDNKLDLAVVNSNENSISILLNNGDGTFQHQKKYEVGSTPKAVTIGDFDNNNRLDLVIVNQDANNISILLGHGDGTFQHQKTYRVGAYPQTVTVGDFNNDNRLDLAINNQMNNTVSVLLGNGDGTFDNQKAYVADAFPTSLVSGNFNEDTKLDLVVTNAGSDNIIILFGNGDGTFPNPTTYKAGKVPVSIAVGDFDNDTILDLVIANSGEDSMSILLGGGDETFQNQTKYRVGPQPQSVIIGDFNNDSKFDVITANHGNRSISILLGNGDGTFQKEKKYRVGPNPSYIAVGDFNNDTILDVVTTNEGENSVSILLGYGNGTFQDQDMYEASFYPKCVVVDDFNNDNKLDLITANSYSVSMSILLGNGDGTFQRPMSYTVDSGLIFVAAADFNNDTNLDLTAVGWGSTVYIILGNGDGTFQEETRYDIADIAQSVAVGDFNNDMKLDVVVANNYDTSISILFGNGDGTFHDPIKSTTGSHPYFVTASDFNNDMKLDLAVTNDQDNNVAILLNSCP
Lasso diagram
Loading diagram...
Comments

The AlphaLasso website is licensed under CC BY 4.0