A0A818C7Z8 F1

VCBS repeat-containing protein
Domain Eukaryota
Family Gnathifera
Species (Full Name) Rotaria socialis
Gene FME351_LOCUS11331 HFQ381_LOCUS13097 LUA448_LOCUS13562 TIS948_LOCUS12912 UJA718_LOCUS15549
PFAM codes  PF13517
InterPro codes  IPR013517,  IPR028994
PDB structures (whole Protein) -
LSLS4,6
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Protein name
VCBS repeat-containing protein
Global pLDDT
79.38
Species
Rotaria socialis
UniProt
Structure Prediction Model
AlphaFold v4:  A0A818C7Z8
PDB structures
-
AlphaKnot
  A0A818C7Z8 Unknown
Model length
712
AlphaFold deposition date
2022-09-30
AlphaLasso deposition date
2024-04-14
Lasso types & Model sequence
show shallow lasso Bridge type DeepShallow Lasso pLDDT Global pLDDT N-end GLN C-end GLN Loop range Loop Length N-term crossings C-term crossings N-end length C-end length Loop area
81.1881.18 79.38 -3.347 -4.588 142-534 393
-30, -45, -77, +130 -30, -45, (-58), (+59), (-59), (+60), -77, (+88), (-94), +130
-540, -584, +599, -613, -680, -705 (+534), (-534), (-535), -540, -584, +599, (+604), (-607), (-608), (+609), (-610), (+610), -613, (-631), (+637), (-645), (+646), (+652), (-654), -680, -705, (-706), (+706)
 141 178 9227
Model Sequence
MVSILLIFLILLNINTTIENLAQSGCQTPFGPNNRYSTQINPVSIINGYFNNDTKLDLAIANDVLGSVSILFNNGDGTFQNQVVYAVGAFPVFVTVGDFNNDAKLDLVTANQAENTISILLNNGNGTFQNEKKYSVGTSPACVTVGDFNNDTKLDLATTNNDDRTISILFGKGDGTFENEKKYEVGSHPQALTVGDFNNDNKLDLAVVNSNENSISILLNNGDGTFQHQKKYEVGSTPKAVAIGDFDNNNRLDLVIVNQDANNISILLGNGDGTFQHQKTYRVGAYPQTVTVGDFNNDNHLDLAINNQMRNTVSVLLGNGDGTFDNQKTYVADAFPTSLISGNFNEDTKLDLVVTNGGSDNIIVLFGNGDGTFPNPTTYKAGKVPVSIAVGDFDNDTILDLVTANSGEDSISILLGGGDETFQNQTKYRVGPQPQSVIIGDFNNDSKLDVITANHGNRSISILLGNGDGTFQKEKKYRVGPNPSYIAVGDFNNDTILDVVTTNEGENSVSILIGYGNGTFQDQDMYEASLYPKCVVVDDFNNDNKLDLITANSYSVSMSILLGNGDGTFQRPMSYTVDSGLIFVAAADFNNDTNLDLTAVGWGSTVYIVLGNGDGTFQEEKRYDIADIAQSVAVGDFNNDMKFDIVVANNYDTSISILFGNGDGTFHDPIKSTTGSHPYAVTASDFNNDMKLDLAVTNDQDNNVAILLNSCP
Lasso diagram
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