A0A818JC17 F1

VCBS repeat-containing protein
Domain Eukaryota
Family Gnathifera
Species (Full Name) Rotaria socialis
Gene KIK155_LOCUS17793
PFAM codes  PF13517
InterPro codes  IPR013517,  IPR028994
PDB structures (whole Protein) -
LSLS5,7
Categories voted by users:
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Protein name
VCBS repeat-containing protein
Global pLDDT
80.44
Species
Rotaria socialis
UniProt
Structure Prediction Model
AlphaFold v4:  A0A818JC17
PDB structures
-
AlphaKnot
  A0A818JC17 Unknown
Model length
712
AlphaFold deposition date
2022-09-30
AlphaLasso deposition date
2024-04-15
Lasso types & Model sequence
show shallow lasso Bridge type DeepShallow Lasso pLDDT Global pLDDT N-end GLN C-end GLN Loop range Loop Length N-term crossings C-term crossings N-end length C-end length Loop area
82.4382.34 80.44 -3.421 -5.588 142-534 393
-37, -47, -77, +108, +137 (-28), (+29), (-33), (+34), (-35), (+36), -37, (-45), (+46), -47, (-56), (+59), (+68), (-69), -77, (+80), (-82), (+88), (-94), (-105), (+105), +108, +137
-540, -583, +600, -613, -652, -680, -704 (-534), -540, (+541), (-542), (-561), (+562), (+578), (-579), -583, (-589), (+590), (-596), (+597), (-598), (+598), +600, (+603), (-604), (-607), (+609), -613, (-620), (+621), (-631), (-632), (+632), (+632), (-632), (+637), (-637), (+638), (-639), (+640), (-644), (+644), (-645), (+645), (-646), (+646), -652, (-656), (+657), (-658), (+659), (-660), (+661), (-671), (+672), (-673), (+675), -680, (-694), (+695), (+695), (-695), -704, (+705), (-705)
141 178 8122
NoneNone 80.44 0.338 0.008 26-711 686
25 1 13929
Model Sequence
MVSILLIFLILLNINTTIENLAQSDCQTPFGPNNRYSTQINPVSIINGYFNNDTKLDLAIANDVLGSVSILFNNGDGTFQNQVVYAVGAFPVFVTVGDFNNDAKLDLVTANQAENTISILLNNGNGTFQNEKKYSVGTSPACVTVGDFNNDTKLDLATTNNDDRTISILFGKGDGIFENEKKYEVGSHPQALTVGDFNNDNTLDLAVVNSNENSISILLNNGDGTFQHQKKYEVGSTPKAVAIGDFDNNNRLDLVIVNQDANNISILLGNGDGTFQHQKTYRVGAYPQTVTVGDFNNDNHLDLAINNQMRNTVSVLLGNGDGTFDNQKTYVADAFPTSLISGNFNEDTKLDLVVTNGGSDNIIVLFGNGDGTFPNPTTYKAGKVPVSIAVGDFDNDTILDLVTANSGEDSISILLGGGDETFQNQTKYRVGPQPQSVIIGDFNNDSKLDVITANHGNRSISILLGNGDGTFQKEKKYRVGPNPSYIAVGDFNNDTILDVVTTNEGENSVSILIGYGNGTFQDQDMYEASLYPKCVVVDDFNNDNKLDLITANSYSVSMSILLGNGDGTFQRPMSYTVDSGLIFVAAADFNNDTNLDLTAVGWGNTVYIVLGNGDGTFQEEKRYDIADIAQSVAVGDFNNDMKFDIVVANNYDTSISILFGNGDGTFHDPIKSTTGSHPYAVTASDFNNDMKLDLAVTNDQDNNVAILLNSCP
Lasso diagram
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