B6UBR8 F1

Transposon protein
Domain Eukaryota
Family Poaceae
Species (Full Name) Zea mays
PFAM codes  PF03169
InterPro codes  IPR004813,  IPR045035
PDB structures (whole Protein) -
LS4
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Protein name
Transposon protein
Global pLDDT
82.5
Species
Maize
UniProt
Structure Prediction Model
AlphaFold v4:  B6UBR8
PDB structures
-
AlphaKnot
Model length
716
AlphaFold deposition date
2022-09-30
AlphaLasso deposition date
2024-04-14
Lasso types & Model sequence
Bridge type DeepShallow Lasso pLDDT Global pLDDT N-end GLN C-end GLN Loop range Loop Length N-term crossings C-term crossings N-end length C-end length Loop area
86.6586.65 82.5 1.783 -0.152 267-697 431
+149, +198, -212, +262 +149, +198, -212, +262
266 19 8865
Model Sequence
MAPHTTAGGGGGAEDEVSEAAAASPALRHRHAGKGEGLGGNGGAGADGQASVERVFADKAVPSWREQLTLRAFVVSALLAVMFSVIVMKLNLTTGIIPSLNVSAGLLGFFFVRMWTAAAERMGFLRQPFTRQENTVIQTCVVSAYGIAFSGGFGSYLFGMSDKIAKQATEAKDANNIKDPHLGWMIGFLFLVSFIGLFALVPLRKIMIVDYKLTYPSGTATAYLINGFHTPEGAKLAKKQVKTLGKYFVFSFFWGFFQWFYTAGDECGFKNFPTLGLEAYNNRFFFDFSPTYVGVGMICPYIVNVSVLLGGFLSWGLMWPLIAKKKGSWYPANLEDSSLHGLQAYRVFISIALILGDGLYNFIKVLIRTIAGFISMVQQNSKSMLPVSDNGSSMSSMEAVSFDDERRIENFLKDQIPKSVAYGGYVAVAAISIGTLPQIFPQLKWYYILVAYVVAPVLAFCNAYGSGLTDWSLASTYGKLAIFVFGAWAGLSHGGVLVGLAACGVMMSIVSTASDLMQDFKTGYLTLASPRSMFISQVIGTGMGCVIGPCIFWLFYKAFGDIGESGTEYPAPYAIVYRNMAILGVDGFGSLPKNCLILCYIFFAAAITINLVRDLTPYKVSRFIPLPMAMAIPFYIGSYFAIDMFLGSAILFVWERLNKAKADAFGPAVASGLICGDGIWTLPQSILALAKVQPPICMKFLSRSTNAKVDSFLGLS
Lasso diagram
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