D2REF3 F1

tRNA (pseudouridine(54)-N(1))-methyltransferase (EC 2.1.1.257)
Domain Archaea
Family Archaeoglobaceae
Species (Full Name) Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18)
Gene trmY Arcpr_1449
PFAM codes  PF04013
InterPro codes  IPR007158,  IPR029026,  IPR029028
PDB structures (whole Protein) -
L1
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Protein name
tRNA (pseudouridine(54)-N(1))-methyltransferase (EC 2.1.1.257)
Global pLDDT
97.75
Species
Archaeoglobus profundus
UniProt
Structure Prediction Model
AlphaFold v4:  D2REF3
PDB structures
-
AlphaKnot
Model length
194
AlphaFold deposition date
2022-09-30
AlphaLasso deposition date
2024-04-15
Lasso types & Model sequence
Bridge type DeepShallow Lasso pLDDT Global pLDDT N-end GLN C-end GLN Loop range Loop Length N-term crossings C-term crossings N-end length C-end length Loop area
96.9196.91 97.75 1.533 None 140-194 55
+126 +126
139 0 646
Model Sequence
MRGFLIVGNKAVTKPFSLKDLAGSAGRMDIICRCIAQALFISHGIRRDVEVYVLLLGEPDPPKALKIVGSEVRYMAPDERNIGGIIRKALSLKVDYSWKRSTPGVYIARKNLIDLLEELSKKYNVVYLREDGVDIRDVACRLENPLFVLGDHIGLREEDEKTVMKYAKIVVSVSKLSLQADQCIVIVHYELDRC
Lasso diagram
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