D3ZWH1 F1

Stabilin 1
Domain Eukaryota
Family Muridae
Species (Full Name) Rattus norvegicus
Gene Stab1 LOC100363145
PFAM codes  PF00008,  PF00193,  PF02469,  PF12947
InterPro codes  IPR000538,  IPR000742,  IPR000782,  IPR001881,  IPR002049,  IPR016186,  IPR016187,  IPR024731,  IPR036378
PDB structures (whole Protein) -
5L1 L2 L1 LSL2,1 L1 LS2 L1 LS3 LS2 L1
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Protein name
Stabilin 1
Global pLDDT
71.16
Species
Rat
UniProt
Structure Prediction Model
AlphaFold v4:  D3ZWH1
PDB structures
-
AlphaKnot
Model length
2574
AlphaFold deposition date
2022-09-30
AlphaLasso deposition date
2024-04-14
Lasso types & Model sequence
show shallow lasso Bridge type DeepShallow Lasso pLDDT Global pLDDT N-end GLN C-end GLN Loop range Loop Length N-term crossings C-term crossings N-end length C-end length Loop area
72.2772.27 71.16 1.127 -0.303 1285-1315 31
+142 +142
1284 1259 404
72.0372.03 71.16 -1.141 -0.15 1573-1585 13
-101 -101
1572 989 106
72.0372.03 71.16 0.082 -1.294 101-110 10
-1583 -1583
 100 2464 83
72.1372.13 71.16 -1.071 -0.137 1548-1561 14
-98 -98
1547 1013 124
46.9246.92 71.16 0.253 -0.785 1890-1912 23
-1949 -1949
 1889 662 263
82.6181.96 71.16 -0.456 -0.75 1654-1832 179
(-1619), (+1619), (-1651), (+1651)
+1851, -1861 +1851, -1861
 1653 742 3414
71.7571.75 71.16 -0.235 -1.485 33-102 70
-1558 -1558
 32 2472 983
72.2872.28 71.16 2.14 -0.79 1276-1299 24
+143, +148 +143, +148
-1311 -1311
 1275 1275 315
64.9164.91 71.16 0.23 -0.812 45-72 28
-88 -88
 44 2502 326
72.2872.28 71.16 2.087 -0.45 1279-1311 33
+143, +148 +143, +148
(-1311)
 1278 1263 410
72.0572.05 71.16 0.269 -0.76 670-695 26
-711 -711
 669 1879 300
72.1472.14 71.16 3.073 -0.094 1264-1325 62
+140, +142, +148 +140, +142, +148
1263 1249 943
72.2872.28 71.16 -0.136 1.992 139-148 10
+1282, +1314 +1282, +1314
 138 2426 100
72.0672.06 71.16 -1.138 -0.205 1555-1571 17
-98 -98
1554 1003 150
Model Sequence
MAEPRILLLLCILVLCLAGSGFIRGQTVRSKRCDIHTKFITHTPCTACAAIRRRLCPSGWSRNFPEKILLDCRYELQLRGSVVSLSGCSQECWKDVVQKACCPGYWGSQCYECPGGPATPCSGHGTCLDGIGGNGTCVCQENFSGSACQDCRDPNRFGPDCQSVCNCVHGVCSRGPQGNGSCQCFAGYTGPHCDQELPVCQSLRCPQNSQCSAEAPACKCLPGYIQQDNACLREPLDPCQPSPCSSLARCSVTPSGQPQCHCPENYHGDGKVCLPQDPCLTNFGGCPSNSTFCLYRAPGKATCMCWPGMTSINNDASEGCHVSCKPHSCDKSATCQVTPDRKTSCVCKSDEVGDGYACYGHLLHEVQRANQIGLVLLRLRVAIAMLEQGCQEILTTSGPFTVLVPSMFSVSAISSSNMNATLAQQLCRQHIIPGEHILENIGPSNTRRWWTLAGQEITVTFKNLRYSYKYEDQPQQFSIQKANYIAANGVFHTVTALRWQLPPPLPGDPKKTVGQILASTEAFTRFETILENCGLPAMLDGPGPFTVFAPSNEAVDSLRDGRLIYLFTAGLSKLQELVRYHIYNHGQLTVEKLISKGRFLTMANQVLTVNISEEGRILLGPEGVPVRRVDVPAANGVIHMLEGILLPPTILPILPKHCDEEQHQTVLGSCVDCQALNTSICPPNSVKMDIFPKECVYTHDPAGLNVLKKGCAEYCNQTITKRGCCKGFFGPDCTQCPGGFSNPCYGKGNCSDGVQGNGACLCFPDYKGIACHICSNPNKHGEQCQEDCGCVHGLCDNRPGSGGVCQQGTCAPGFQGRFCNESMGNCGSLGLAQPCHPDAHCVIQEGVARCVCHDGFEGNGFSCKRSSPCSHPDRGGCSENAECVPGDLGTHQCICHKGWSGDGRICVAIDECGLDTRGGCHADALCSYVGPGQSRCTCKLGFAGDGYECSPIDPCRVGNGGCHGLATCKAVGGGQRVCTCPPHFGGDGFSCYGDIIQELEANAHFSAFSQWFKNSSITLPADGKLTALVPSESAIRRLRPEDQAFWLQPKTLPELVRAHFLQGAFSEEELARLSGQQVATLSATTHWQIHNTSGRVQVQNATVDVPDLLATNGVLHIISQVLLPPRGDMQTGPGLLQQLDSVPAFRLFGEQLKHHKLVAQIEAAKAYTIFVPTNHSLETQGNKSILGIDIVRHHVILGEALSVEVLRKGGHRNSLLGPAHWLVFYNHSGQPEVNHVPLEGPLLEAPGSALFGLSGILAVGSSRCLHSHAEALREKCVNCTRKFRCTQGFQLQDTPRKSCVYRSGLSFSRGCSYTCAKKIQVPDCCPGFFGTLCEPCPGGLGGVCSGHGQCQDRFLGNGECRCQEGFHGTACEMCELGRYGPTCSGVCDCDHGLCQEGLRGNGSCICNVGWQGLRCDQKITDRQCPKKCDPNANCIQDSAGIPVCVCAAGYSGNGSYCSEVDPCTSGHGGCSPYANCTKVAPGQRTCTCLDGYTGDGELCQEINSCLVHNGGCHVNAECIPTGPQQVSCNCREGYSGDGIQSCKLLDPCSQNNGGCSPYAVCKSTGDGQRTCSCDSTHTVGDGITCHGRVGLELLRNKYASFFSLHLLEYKELKGDGPFTIFVPHSDLISNMSQGELARMRAHRQLVFRYHVLGCRKLGSQELLDQGYVTALSGHTLRISEREGSIYLNDFARVVSSDHEAVNGVLHFIDRVLLPPDVLHWEADTIPIPRRNVTAAAESFQYKIFSRLLTVAGLLPMLQDASHRPFTMLWPTDSALEALSPDRKNWLYHEDHRDKLAAILRGHVIRNIEASASDLPNLGQLRTMHGNTISFSCGLARPGELMVGENEARIVQRYLLFEGGLAYGIDQLLEPPDLGARCDRFEPQPLQTKTCSICGLEPPCPRGSREQGSPEACWRHYSKFWATPLHSITMRGGSWITPSFWNRNHMGRGCHRKCVTTVWKPSCCPGHYGADCHACPGGPRSPCSGHGVCLDGISGSGQCNCHPGFAGTACELCAPGAFGPQCQACRCAPHGRCDEGLGGSGSCFCDEGWTGPRCDVQLELQPVCTPPCAPQAVCRVGNSCECSLGYEGDGRVCTVADLCQKGHGGCSKHANCSQVGTVVTCTCLPAYEGDGWSCRARNPCLDGHRGGCSEHADCFNTGPNTRRCECHTGYVGDGLQCLEELEPPVDRCLAESSPCHTDALCTDLHFQEKQAGVFHIQATSGPYGLTFSEAKEACEDQGADLASLPQLSAAQQLGFHVCFLGWLANGSAAHPVVTPAADCGNNRVGVISLGVRKNLSERWDAYCYRVRDVACQCRVGFVGDGISTCNGKLLDVLAATADFSTFYGMLLGYANATQRGLDFMDFLEDELIYKTLFVPVNEGFLDNMTLSGPDLELHASNATFLSANASQGTLLPAHSGLSLFISDTGPDNISLVPLAPGAVVVSHVMVWDIMAFNGVIHALASPLLTPPQPRAVLGSEPQPVALSLGVVITCGTLLGLVAGALYLRARRKAPGFSFSVFQAEDNADDDFSPWQEGTSPTLVSVPNPVFGSSDIFCEPFDDSVLEEDFPDTQRVLKVK
Lasso diagram
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