| Domain |
Bacteria
|
| Species (Full Name) |
Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11)
|
| Gene |
Thexy_0288
|
| PFAM codes |
PF00317, PF02867, PF12637, PF14528, PF14890
|
| InterPro codes |
 IPR000788, IPR003586, IPR003587, IPR004042, IPR004860, IPR006141, IPR006142, IPR008926, IPR013344, IPR013509, IPR024434, IPR027434, IPR030934, IPR036844, IPR050862
|
| PDB structures (whole Protein) |
-
|
| Protein name |
Ribonucleoside-diphosphate reductase (EC 1.17.4.1)
|
| Global pLDDT |
79.88
|
| Species |
Thermoanaerobacterium xylanolyticum
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 F6BGC6
|
| PDB structures |
-
|
| AlphaKnot |
 F6BGC6 41
|
| Model length |
1180
|
| AlphaFold deposition date |
2022-09-30
|
| AlphaLasso deposition date |
2024-11-04
|
| Bridge type | Deep Lasso pLDDT | Global pLDDT | N-end GLN | C-end GLN | Loop range | Loop Length | N-term crossings | C-term crossings | N-end length | C-end length | Loop area | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
 |
None | 79.88 | -0.125 | -0.029 | 1168-1179 | 12 | 1167 | 1 | 83 | ||||||
Model Sequence |
MNLTENSKKVLERRYLAKDENGRVVETVEELFERVAKAISDVDKEYDINADTEKVKKKFYEMMTNLDFLPNSPTLMNAG 80
RPLGQLSACFVLPVGDSMEEIFDAVKYAAIIHKSGGGTGFSFSRLRPKGATVRSTGGVASGPVSFMKVFNSATEAVKQG 160 GTRRGANMGILRIDHPDILEFIQCKQDNNEITNFNISVGITEDFMKAVEKGQDYDLIDPHTNKVVKSLNAREVFKLIVE 240 MAWKNGEPGIVFLDRINEKNPTPLVGEIESTNPCVTGDTWVSTEYGLMRIDEIYNKYQNGGLNIVTDNRVPMTQYQVVN 320 GGYITEAVPDLNSEGTSLNMISKVYNNGEKDVIKLTLKSGYEIKATPDHRFLTSKGWKELSRIKIGDEILIQSGDGFFS 400 NVYELPFKVDNIYTGNNGRTYTLNLPNKWSKELGQTLGWLIGDGWLRDGDKDTRVGFTFGNDDVEVMYHLKPFINNIYG 480 KDVKEVKRENGVYHLSYHSKYLVEFFKKLGVKNVKAENKQVPQSIYKAPYEAVVGFLQALFTADGSVRDNPKSNSSWVV 560 LTSKSKRLLQDVQILLINLGMKSVIFDRSRKPRKATFKYTSVNGEEKFYSTDGILYELGIFGKSRDKFAKEIGFMSEKK 640 QKALSNIKYKSFYKTKFYDEVAAIEKIGKEVVYDLTEPVTHSMICNGIVVHQCGEQPLLPYESCNLGSINLKNMLKEEN 720 GKYEVDYGKLRDTVHNAVHFLDNVIDANKYPLQQIDEMTKGTRKIGLGVMGFADMLLMLNIPYNSEEAVEFADKLMKFI 800 DEESKAASMELAEKRGVFKYYDKSIYKDKNIRLRNATTTTIAPTGTISIIAGTSSGIEPLFAIAMTRNVMDNTQLVEVN 880 PVFKEVALKRGFYSEELMKKIAQQGTLKGIDGIPDDVKRVFVTAHDIDPVWHIRMQSAFQKHVDNAVSKTVNFRHDATV 960 DDVREVYELAYKLGLKGVTIYRDGSRDSQVLNLGIKKVEKEGVKEDKQEGRNQIVPRPRPSVTKGITEKVRIGCGNLYI 1040 TVNYDDKGICEVFTNLGRAGGCPSQSEATSRLISIALRSGLDAKSIVEQLKGIRCHSTLRQMANNKEIKVLSCPDAIAK 1120 VIEKVMKLKVEEDESFAPIDVPINGSSHKNDDAALQAAYTYDTQEERFCPECGSEIEHEGGCVVCKNCGYSKCG |
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F6BGC6