Q8AV58 F1

Protein sidekick-1
Domain Eukaryota
Family Phasianidae
Species (Full Name) Gallus gallus (Chicken)
Gene SDK1
PFAM codes  PF00041,  PF07679,  PF13927
InterPro codes  IPR003598,  IPR003599,  IPR003961,  IPR007110,  IPR013098,  IPR013783,  IPR036116,  IPR036179
PDB structures (whole Protein) -
L1 2LS3
Categories voted by users:
Structure view
Help
Protein name
Protein sidekick-1
Global pLDDT
73.03
Species
Chicken
UniProt
Structure Prediction Model
AlphaFold v4:  Q8AV58
PDB structures
-
AlphaKnot
  Q8AV58 Unknown
Model length
2169
AlphaFold deposition date
2022-09-30
AlphaLasso deposition date
2024-04-15
Lasso types & Model sequence
show shallow lasso Bridge type DeepShallow Lasso pLDDT Global pLDDT N-end GLN C-end GLN Loop range Loop Length N-term crossings C-term crossings N-end length C-end length Loop area
78.9278.75 73.03 0.247 1.558 267-314 48
+1604 +1604, (+1608), (-1609)
 266 1855 608
79.5779.57 73.03 -0.143 -2.054 360-410 51
+1272, -1355, -1385 +1272, -1355, -1385
 359 1759 624
80.0480.04 73.03 -0.261 -3.425 78-121 44
-767, -793, -851 -767, (+788), (-789), -793, -851
 77 2048 608
Model Sequence
MVGRKVDREIIARRNSRRDGMMMKLNFCFFFCRRWWAFLLLQLHMLQALAQDDVAPYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWLHNDSEITTYSSEYKYIIPALQRSDAGFYQCIVRNRMGALLQRRSEVQVAYMGNFMDANQKKTVTEGEAAVLNFMHIFSYPRPQVTWFRDGHKIIPSSRIAITLENQLVILATSVADAGGYYAQAVNEKNGENKTSPLIHLSIASATDPSDPTAPIIVIPPQNKSVVVGTSEVTLECVASARPVERLSIMWKRNGIKITSGISSFGRRLTITNPTSADVGMYFCEAKLRDSTEEPARAKAFISLMVPPYFTAEPEGVILAEVEKDVDILCQAMGVPIPSLVWYKDSVPLSKLQNPRYKVLLSGGLRIHALRPQDAGIFQCFASNKAGEIQTYTYLDVTNIKPAFIQPPEDTTVTEGMTAMLTCEVSGAPKPAISWKKGNQILASGSVQIPRFVLLESGGLQITPVFLQDAGNYTCHAVNSEGALNAFVMLTVWNRTFIVHPPENSTVIKGTTATLRCEATHDPRISIRYVWKKDSVVINPSSSSRITVEKDGTLLISQTWSGDIGDYTCEVISFGGNDSRMARLEVIELPHSPQNLLATLNSSYSRSVVLSWVRPFDGNSPVLYYMVELSENNSPWKVHLSNLDPKMTSVTVSGLTPARTYQFRVCAVNQVGKGQYSSETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPESEHNGVLHGYILRYRLAGLPGEYQYKNITSAEINYCLVTDLIIWTQYEIQVASYNGAGLGAFSRPVTEYTLQGVPTAPPQNVQVEAVNSTTIQFLWSPPPQQFINGINQGYKLLAWPVDAPGSVTVVTIAPDFHGVHSGCITNLKKYTTYYTSVLCFTTPGDGPRSAPQLLRTLEDKPGAVGHLSFTEILDTSLKVSWQEPVEKNGIITGYQLSWEVYGRNESRLTRTLTNTTLEYKITGLSSLTTYTIEVAAVTAKGSGWVTSSTISSGVPPELPGAPSNLVISNISPRSATLQFRPGYDGKTSICKWIVEGQVGVLGEEEEWVSLHEVDNEPDAQMLEVPNLTPYTHYRFRMRQVNVVGASPLSQPSRVIQTLQAPPDVAPGSVSVRTASESSLRMRWVPLPDTQYNGNPESVGYRIKFWRVDLQPSALLKVISDRLERECTIQDLEEWTEYELQIQAFNAIGAGPWNEVVGVRTRESVPSAPPENVSAEAVSSTQILLTWSAVPESEQNGLILGYKILYKAKDLDSEPRSQTVRGNHTQSCLLSGLRKYVLYEIRVLAFTRIGDGVPSSPVLTERTKDDAPGPPIRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLASSSPNKFTTVEVGSTVRQFTATDLTPESAYIFRTSAKTRQGWGEPLEATVITTEKRERPAPPQQLTTPQSDVSSRSLQLHWVPGSDGSSPIRYFTVQVRELPNGDWQTYSSSISHEATSCIIESLNPFTSYKLRVKATNDIGDSDYSAETEAVTTLQDVPDEPPSSVLVTPHTTSSVLVQWQPPKAESLNGLLLGYRIYYRELDYDAGSATESKAVKNPSALRAELTPQSSFKTVNSSSALTTYELTQLKKYKRYEVLMTAYNVIGESPTSTPVEVFVGEAAPAMAPQNIQVNSLSASQLELTWDPPPADSQNGNIQGYKIYYWEGDVQNDTEKVKVFSSLRQLSASKNLTSHTRYLVCISAFNAAGDGPRSRPSAGRTHQAAPSAPSFLVFSEITSTTLNVSWGEPTAANGVLQGYRVVYEPLAPVQGVSKVVTVDIKGNWQRWLKVRDLTKGMTYLFRVQARTIAYGPELQANVTAGPAEGSPGSPHEILVTKSASGLTVQWTEGDSGEKPTTGYIIEARPSDEGLWDMFVKDIPRSATSYTVSLDKLKQGVTYEFRVVAVNEFGYGEPSVPSVAVSAQTEAPFYEEWWFLLVMALSSLILILLVVFALVLHGQSKKYKNCSTGKTISNVEESVTLDNGGFTALELNSRHLNIKSTFSKKNGTRSPPRPSPGGLHYSDEDICNKYNGAVLTEGLGLNEKPLEMSESEATDSDYEDELPKHSFVNHYMSDPTYYNSWKRQQKGVKHPTSYRYEECSASETEPYFQTVITTQSSGGVYTPTGQPAPGSRTPVTGFSSFV
Lasso diagram
Loading diagram...
Comments
How to cite

The AlphaLasso website is licensed under CC BY 4.0