Q8CJH3 F1

Plexin-B1
Domain Eukaryota
Family Muridae
Species (Full Name) Mus musculus
Gene Plxnb1 Kiaa0407
PFAM codes  PF01403,  PF01437,  PF01833,  PF08337,  PF17960,  PF18020,  PF20170
InterPro codes  IPR001627,  IPR002165,  IPR002909,  IPR008936,  IPR013548,  IPR013783,  IPR014756,  IPR015943,  IPR016201,  IPR031148,  IPR036352,  IPR041019,  IPR041362,  IPR046800
PDB structures (whole Protein)  8BB7 A/B: 20-535  8BF4 C/F: 20-535
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similar chains with experimentally solved models (PDB) in the AlphaLasso database (?% sequence similarity)
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similar chains with experimentally solved models not found in AlphaLasso database but found in thePDB database (?% sequence similarity)

  
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L1 LSLS9,11
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Protein name
Plexin-B1
Global pLDDT
74.95
Species
Mouse
UniProt
Structure Prediction Model
AlphaFold v4:  Q8CJH3
PDB structures
AlphaKnot
Model length
2119
AlphaFold deposition date
2022-09-30
AlphaLasso deposition date
2024-04-14
Lasso types & Model sequence
show shallow lasso Bridge type DeepShallow Lasso pLDDT Global pLDDT N-end GLN C-end GLN Loop range Loop Length N-term crossings C-term crossings N-end length C-end length Loop area
65.4365.43 74.95 -0.309 1.206 252-377 126
+884 +884
 251 1742 2052
74.6675.01 74.95 1.476 1.977 641-911 271
+68, -98, +136, -154, +166, -279, +293, +377, -397 (+30), (-36), (+50), (-53), +68, (-80), (+82), -98, (+112), (-114), (+115), (-118), +136, -154, +166, (-187), (+194), (-196), (+197), (-222), (+227), (-251), (+254), -279, +293, (-315), (+316), (-322), (+331), (-332), (+332), (-333), (+334), +377, -397, (+402), (-406), (+423), (-425), (+439), (-439), (+448), (-452), (+470), (-471), (-528), (+530)
+1252, -1271, +1281, -1541, +1689, +1850, -1924, +1984, -2002, +2005, -2031 +1252, -1271, +1281, (-1312), (+1313), (-1314), (+1317), (-1339), (+1345), -1541, +1689, +1850, -1924, (+1970), (-1971), (+1972), (-1976), +1984, (-2001), (+2001), -2002, +2005, (+2028), (-2029), -2031, (+2033), (-2034)
 640 1208 21635
NoneNone 74.95 -0.11 0.282 79-88 10
78 2031 74
Model Sequence
MSVLGPVLLQVFWAGCVVTLRSPLPAAFTANGTHLQHLARDPTTGTLYVGATNFLFQLSPGLQLEAVVSTGPVNDSRDCLPPVIPDECPQAQPTNNPNQLLLVSPEALVVCGSVHQGICELRSLGQIRQLLLRPERPGDTQYVAANDPAVSTVGLVAQGLVGEPLLFVGRGYTSRGVGGGIPPITTRALRPPDPQAAFSYEETAKLAVGRLSEYSHHFVSAFVRGASAYFLFLRRDLKAPSRAFRAYVSRVCLQDQHYYSYVELPLACQGGRYGLIQAAAVATSKEVARGDVLFAAFSSVAPPTVDWPLSASTGASGTSVLCAFPLDEVDQLANYTRDACYTREGRAENGTKVADIAYDVLSDCAQLPVDTPDAFPCGSDHTPSPMVSCVPLEATPILELPGVQLTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGRSAAPYSKQSIQPGSPVNRDLTFDGTFEHLYVATQTTLVKVPVAPCAQHLDCDSCLAHRDPYCGWCVLLGRCSRRSECSRDQGPEQWLWSFQPELGCLRVVAVSPANISREERREVFLSVPGLPSLWPGESYFCYFGDQQSPALLTSSGVMCPSPDPSEAPVLQRGADHISVNVELRFGAVVIASTSLSFYDCVAVTASSPSAPCRACVSSRWGCNWCVWQQLCTHKASCDAGPMVASQQSPLLPLIPPARDELTPFPPTVPQTTVTPTPNSFPIEPRAPSTASDVLPGAKPSRLSLWGPWAGPGPILSPTSTESPLHEKPLPPDPPTIPGTTVPAPTGLGPSTTPEDLLASYPFPSDAAAVSPAEPGPEALPSMVALDQPPGTVPDTTFPGAPGSMKPVLDWLTKGGGELPEADEWMGGDTPAFSTSTLLSGDGDSAEHEGPPAPLILLSSLDYQYDTPGLWELGEVNQRVSSCPCVETVQGSLLIPVHVEREVQLRGRNLWLFQDGPRSSECVLELGSREVAVEAQVECAPPPDVWCHIKCQQHQFSYEALKPELQVGLFLRWAGGLRVDSADGLHVVLYDCSVGHGDCSRCQTAMPQYDCVWCEGERPRCVAREACNEAETVATQCPAPLIHSVDPLTGPIDGGTRVTIRGSNLGQHVQDVLDMVRVAGVPCAVDAGEYDVSSSLVCITGASGEEVTGTVAVEVPGRGHGVSEFSFAYQDPKVHSIFPARGPRAGGTRLTLHGSKLLTGRLEDIRVVVGDQPCHLLLEQQSEQLHCETGPYPVPAELPVTVLFGATERRLQHGQFKYTSDPNVTSVGPSKSFFSGGREIWVRGQDLDVVQRPRIRVTVVPRQHGQGLAQKQHVVPEKFEEPCLVNSSHLLMCRTPALPGPPWDSGVQVEFILDNMVFDFAALSPTPFSYEADPTLRSLNPEDPSTPFRHKPGSVFSVEGENLDLAMSKEEVVAMIGDGPCVVKTLTRNHLYCEPPVEQPLPHPHALREAPDALPEFTVQMGNLRFSLGHVQYDGESPVAFPVAAQVGLGVGTSLLALGVIIIVLIYRRKSKQALRDYKKVQIQLENLESSVRDRCKKEFTDLMTEMTDLTSDLLGSGIPFLDYKVYAERVFFPGYRESPLHRDLGVPDSRRPTVEQGLGQLSNLLNSKLFLTKFIHTLESQRTFSARDRAYVASLLTVALHGKLEYFTDILRTLLSDLVAQYVAKNPKLMLRRTETVVEKLLTNWMSICLYTFVRDSVGEPLYMLFRGIKHQVDKGPVDSVTGKAKYTLNDNRLLREDVEYRPLTLNALLAVGPGAGEAQCVPVKVLDCDTISQAKEKMLDQLYKGVPLAQRPDSCTLDVEWRSGVAGHLILSDEDVTSELQGLWRRLNTLQHYKVPDGATVALVPCLTKHILRENQDYVPGERTPMLEDVDEGGIRPWHLVKPSDEPEPPRPRRGSLRGGERERAKAIPEIYLTRLLSMKGTLQKFVDDLFQVILSTSRPVPLAVKYFFDLLDEQAQQHGISDQDTIHIWKTNSLPLRFWINIIKNPQFVFDVQTSDNMDAVLLVIAQTFMDACTLADHKLGRDSPINKLLYARDIPRYKQMVERYYADIRQTVPASDQEMNSVLAELSRNCSADLGARVALHELYKYINKYYDQIITALEEDGTAQKMQLGYRLQQIAAAVENKVTDL
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