V4WA60 F1

Oligopeptide transporter 3
Domain Eukaryota
Family Rutaceae
Species (Full Name) Citrus clementina (Clementine) (Citrus deliciosa x Citrus sinensis)
Gene CICLE_v10014396mg
PFAM codes  PF03169
InterPro codes  IPR004648,  IPR004813
PDB structures (whole Protein) -
LS3
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Protein name
Oligopeptide transporter 3
Global pLDDT
84.06
Species
Clementine
UniProt
Structure Prediction Model
AlphaFold v4:  V4WA60
PDB structures
-
AlphaKnot
Model length
739
AlphaFold deposition date
2022-09-30
AlphaLasso deposition date
2024-04-15
Lasso types & Model sequence
show shallow lasso Bridge type DeepShallow Lasso pLDDT Global pLDDT N-end GLN C-end GLN Loop range Loop Length N-term crossings C-term crossings N-end length C-end length Loop area
86.3186.31 84.06 1.712 0.184 244-719 476
+135, +169, -182 +135, +169, -182, (+243)
243 20 9726
Model Sequence
MATKTQTESSEKPNGDSTEERCPIEEVALIVPETDDPTMPVMTFRAWFLGLTSCTLLIFLNTFFTFRTQPLTISAILMQ 80
IAVLPIGKFMARILPNKEFQVLGWRFSLNPGPFNIKEHVIITIFANCGVSFGGGDAYSIGAITVMKAYYKQSLNFLCGL 160
LIVLTTQILGYGWAGMLRRYLVDPVEMWWPSNLAQVSLFRALHEKESKSKGLTRMQFFLIALAASFAYYTLPGYLFPIL 240
TFFSWVCWAWPHSITAQQIGSGYHGLGIGAFTLDWAGISAYHGSPLVTPWTSILNVGIGFVMFIYIIVPLCYWKFDTFD 320
ARKFPIFSNQLFSSSGHKYDTTKILTPQYDLNIPAYNSYGKLYLSPLFALSIGSGFARFTSTLTHVALFHGSAILEQSR 400
SAMKNMKLDVHARLMKSYKQVPQWWFYVLLLGSIGLSLLMSFVWKDEVQLQWWGMLFAFALAWIVTLPIGVIQATTNQQ 480
PGYDIIAQFMIGYVLPGKPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQLVGTLVSGVVNLGVAWWML 560
ESVENICDVESLHPDSQWTCPKYRVTFDASVIWGLIGPRRLFGPGGMYRNLVWLFLVGAVLPVPVWVLSKVFPEKKWIP 640
LINIPVISYGFAGMPPATPTNIASWLITGMIFNYFVFRYHKRWWQKYNYVLSAALDAGTAFMGVLLFFALQNNDINLKW 720
WGTHVDHCPLATCPTAPGIAVEGCPVFK
Lasso diagram
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