X6M2K1 F1

WD-40 repeat-containing protein
Domain Eukaryota
Family Reticulomyxidae
Species (Full Name) Reticulomyxa filosa
Gene RFI_30175
PFAM codes  PF00400,  PF00805
InterPro codes  IPR001646,  IPR001680,  IPR015943,  IPR019775,  IPR020472,  IPR036322
PDB structures (whole Protein) -
LSLS2,9 LSLS4,7 LSLS7,4 LSLS6,5 LS11
Categories voted by users:
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Protein name
WD-40 repeat-containing protein
Global pLDDT
74.12
Species
Reticulomyxa filosa
UniProt
Structure Prediction Model
AlphaFold v4:  X6M2K1
PDB structures
-
AlphaKnot
  X6M2K1 Unknown
Model length
805
AlphaFold deposition date
2022-09-30
AlphaLasso deposition date
2024-04-14
Lasso types & Model sequence
show shallow lasso Bridge type DeepShallow Lasso pLDDT Global pLDDT N-end GLN C-end GLN Loop range Loop Length N-term crossings C-term crossings N-end length C-end length Loop area
77.3476.74 74.12 -5.68 -5.054 274-568 295
-170, -177, -203, -219, -261, -268 -170, -177, (+188), (-189), (+190), (-195), (+196), (-196), (-197), (+197), (-198), (+199), -203, -219, (+232), (-235), -261, (+263), (-263), -268, (+272), (-272)
-598, -614, -640, -681, -723 -598, -614, -640, -681, -723, (+743), (-743), (+744), (-744)
 273 237 6321
77.3477.07 74.12 -3.794 -7.018 232-526 295
-170, -177, -204, -219 -170, -177, (+188), (-188), (+189), (-196), (-197), (+197), (-198), (+198), -204, -219, (+230), (-230)
-556, -559, -597, -614, -640, -681, -723 -556, -559, -597, -614, -640, -681, -723, (-732), (+733)
 231 279 6416
77.3876.78 74.12 -6.787 -3.887 316-610 295
-171, -177, -203, -219, -261, -268, -302 -171, -177, (+189), (-195), (+196), (-196), (-197), (+197), (-198), (+199), -203, -219, (+219), (-219), (+232), (-235), -261, (+263), (-263), -268, (+276), (-277), -302, (+304), (-304), (+314), (-314), (+315)
-614, -640, -682, -723 -614, -640, -682, -723, (-732), (+733), (-743), (+743), (-744), (+744)
 315 195 6521
76.9876.98 74.12 -10.634 0.259 442-736 295
-170, -177, -204, -219, -260, -268, -302, -320, -345, -387, -430 -170, -177, (+190), (-190), (+190), (-196), (-197), (+197), (-198), (+198), -204, -219, (+232), (-235), -260, (+260), (-260), (+263), (-263), -268, (+274), (-277), -302, (+316), (-317), -320, (+345), -345, (-345), (+358), (-361), -387, (+387), (-387), (+400), (-404), -430, (+440), (-440), (+441)
441 69 6449
77.3476.74 74.12 -1.926 -9.177 190-484 295
-170, -177 -170, -177, (+188), (-189)
-491, -513, -556, -559, -598, -614, -639, -681, -723 -491, -513, -556, -559, (-564), (+564), -598, -614, -639, -681, -723, (+723), (-723), (+733), (-733), (-743), (+743), (-744), (+744)
 189 321 6290
Model Sequence
MSRILCAQKIIFDIISWKPNAETALNDQEFQRQFETNVEKLLINYKLLNEEIGIIKFIAERIHDQKSIFLNLKSRLFRIIEASKKSNNVCIAAANAVTILNSASINLHYQNWSNVKIPYAILDHAFLEGTKFDNANLDDVNFFQAYLNNSNFVNASMNRIYFGEYAYLEGHLDNINRAQYSFDCSKIVSCADDKTIQIWDALSAKQLQVMHGHVREVTGARFSPDDTKIVSCSWDKTIRIWDVVSGKQLQILKGHMSGVTEAHFSSDGTKILSCSNDTTIRIWDVSSGKQLQLFEGHSEEVNGAQFSKDGLKVLSCSSDNTIRIWDISSGKEIKLLEGDSEIVFTAQFSPDCLKIISCSNAETIQIWDALSGKQIQLLEGHLAPVCKAYFSPDGLKIVSSSYDGTVRIWDSASGRQIQILEGHSGWVNEAQFSPDGSKIVSCATDQTIRIWDVSSGKEVQLKEGHLSWVFTVQFSPDGLKIVSCSNDRTIRIWDVLSGRQIQSLEGHSAGVTGAYYSPDGSQIVSCSWDKTVRIWDSCSGETLQLLKGHLEVIVDAQFSIDCSKVVSCSRDKTIRVWDALSGKQIQLFEGHSEDVKAAQFSPDASKILSCSLDKTIRIWDVSSGKQIQVLEGHNGGVSEARFSADGSKLVSCSKDTTIRIWDVMSGKQLQILEGHSKGVNGAQFSFDCSKILSCSIDKTIRIWDVSSGKQIQILEGHSDIVNKAQFSFDESKIVSCSTDKTIRLWSVDSKSWDMATDLSRDSHLSKKDGDILTNTENQNLLDAFGDRVFKVACQLKVVFGKMSMA
Lasso diagram
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