X6M6Y5 F1

WD-40 repeat-containing protein
Domain Eukaryota
Family Reticulomyxidae
Species (Full Name) Reticulomyxa filosa
Gene RFI_28155
PFAM codes  PF00400
InterPro codes  IPR001680,  IPR015943,  IPR019775,  IPR020472,  IPR036322
PDB structures (whole Protein) -
LSLS2,14 LSL14,1 LSLS5,11
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Protein name
WD-40 repeat-containing protein
Global pLDDT
70.88
Species
Reticulomyxa filosa
UniProt
Structure Prediction Model
AlphaFold v4:  X6M6Y5
PDB structures
-
AlphaKnot
  X6M6Y5 Unknown
Model length
1002
AlphaFold deposition date
2022-09-30
AlphaLasso deposition date
2024-04-14
Lasso types & Model sequence
show shallow lasso Bridge type DeepShallow Lasso pLDDT Global pLDDT N-end GLN C-end GLN Loop range Loop Length N-term crossings C-term crossings N-end length C-end length Loop area
NoneNone 70.88 -2.431 -12.101 352-688 337
-332, -340 -332, -340, (-348), (+348)
-695, -718, -721, -739, -760, -778, -791, -802, -844, -859, -885, +898, -927, -956 -695, -718, -721, (-727), (+727), (-728), (+728), (+733), (-734), -739, (-746), (+748), -760, (-767), (+768), (-769), (+770), (+770), (-770), -778, -791, (+792), (-793), -802, (-808), (+810), (+811), (-811), (+820), (-821), (+822), (-822), (-830), (+836), -844, (-850), (+854), -859, (+860), (-861), (+870), (-871), -885, +898, -927, (+943), (-944), (-947), (+948), -956
 351 314 7280
76.0376.03 70.88 -13.691 -1.354 646-940 295
-332, -340, -356, -368, -381, -399, -407, -426, -441, -463, -468, -485, -547, -633 -332, -340, -356, (+358), (-359), (-360), (+360), (-361), (+361), -368, -381, (-388), (+393), -399, -407, -426, (+434), (-434), -441, -463, -468, (+476), (-476), -485, (+504), (-506), (-511), (-516), (+516), (+520), -547, (+589), (-592), (+592), (-592), (+604), (-609), -633, (+644), (-644), (+645)
-957 (+943), (-944), (-947), (+947), -957
 645 62 6020
76.0976.0 70.88 -5.681 -9.255 394-730 337
-332, -340, -356, -368, -382 (-329), (+330), -332, -340, (-348), (+348), -356, (+358), (-358), (-359), (+359), (-360), (+360), (-361), (+362), -368, -382, (-388), (+392), (-392), (+393)
-739, -760, -778, -791, -802, -844, -859, -886, +898, -928, -956 (+733), (-734), -739, (+740), (-741), (-746), (+748), -760, (-767), (+768), (-768), (+769), (-769), (+770), (-770), (+770), -778, -791, (+792), (-793), -802, (-808), (+810), (-811), (+812), (+820), (-821), (+822), (-822), (-830), (+836), -844, (-850), (+854), -859, (+860), (-861), (+870), (-871), -886, +898, -928, (+943), (-944), -956
 393 272 7345
Model Sequence
TLKNYPNLHKMMEEPFLLQLILTVLPSLLKRHPVGTKISRAQLYEAFNEQWIDLHVQNISNKLAELRIQTNLKKIKATFQQYIATENYIRYESEEIIIKLDPNMKTERKDIGAKTEVKKNENDYSSSKTCNVWEKYFNGDSVAKYVLRRIGDNKYQFLHKSCQEYYAAQKIVLDIVSWKPSLDSADISNQQFQQQFEAHVPNLSINFKLLNEKASVIKFIADRIYDIGPIFTNLKSRLFRIIEASKTNEKVSIAAANAVTILNSGGISLHRQNWKNIKIPNAILDRAFLDGTNFKDANLDNVSFFQSLLNNTNFSNASMNGIYFGEYAYLEGHAGIIYEARLSPDNSKIVSCSHDKTVRIWDMLSGRQIHKLQGHLHAVYETKFSPDGTKVVSCSEDKTIRIWEVLSGRQLQVLNGHTDSVNGVQFSPDGSKVGSYSVDNTIRIWEVASGRELQTLQGHSQRVYEAQFSPDGLKILSCSQDNTVRIWDVLSGQQIQIMKGHFDAVNGAQFSPDGSKVASRSWEKTIRIWDVASGQQIQKLEGHSDWMTAVQFSPDGSKLVSSSLDKTICIWDVSSGRQIQTLEKHSDWVNGVRFSLDGSKLVSYSRDKTIRIWDVSSGVELQVLEGHSGEIKAAQFSSDASKIISCSWDKTVRIWDVSVGGERQATKGHSSWVNDVNFSRDGSKIVSCSRDKTIRVWETSSGRELQMMEGHTDSVYGVQFSSDGLKIVSCSKDNTVRVWDVTSGRELQKMQRHSDLVCKSQFSPDDSKIVSCSRDNTARIWDVLSGQELRVLEGHSSWVNDVQFSPDGLKIVSCSTDGTIRIWEAASGQQLQLLEGHLSWVNGVQFSSDGSKILSCSNDNTIRIWDVSSGHEILKLTAQANWVKRAQFSPDNSKVVFCSGSKTIKIWDLPFGRDLFVIEGHVECTNGIRFSPDGSKVVSCSRDKTIRLWDVESGLNAMKSEVSSDAISSKDTPTKSSHQHLLLKLAWLNVFGKWVFKAVVYQ
Lasso diagram
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